| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5640 |
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| Symbol | |
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| ID | 7381114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 665201 |
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| End bp | 666103 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643649208 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002547445 |
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| Protein GI | 222106654 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.203557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATAA AAGCACTGAT CTATTTCGAT GAACTGGTGC GAACCCGCTC GATGCGGGCC
GCTGCCGAGC GTCTGAATGT GCAGCCGACC GCCTTTGCCC GACAGATCGA TCAATTGGAG
CATTATTTCG GCACGGTGCT GATCGAACGG TCGAGCCGGG GCATCCAGTT GACGGCGGCG
GGCGAGCTGC TGGCGGCAAG AGCGGGCAAG ACATTGCGGG AGCTGAACCA TGTTCACCAG
TTGATCGACG ATCTCCAGGG CTTGAAGCGC GGCCATGTCA CTATCCACGC AAACGGTGCG
ACGGTTGCCA ATTTGCTGGC ACCGGCTCTG GCCGATTTCA GCCTGGTCTA TCCCAATATC
CGGTTTTCGG TGACCATTTC CAGCGCTGGT CAGGCGATGG AGGCCTTATC GAGTGCCAAG
GCGGACATGG CTGTTACCCT GTTTTCCGAG CCTGATCCGG GCATACGGGT GCGGGCACGG
GCGCAGATCG TCTATGATGT CATCGCCGCC AGCCATCATC CGGCAGCGCA CTTGGCGGAA
ATGACCGTCA CCGAGCTTGC CCGCTTTCCG CTGGCGGTGC CGGATGGGTC CTTTGGTGCG
CGCCGGGCCT TCGATGCCTG GTTTTCCAAG GCCGGTCTGG AGCTTGATCC GGTTTTTGTG
ACGGGGTCGC TGGAAATGCA GCGCGAACTC GTGCTGCGCG GCGCGGCCCT GACGTTGCTG
CCAGCCCAGA CGGTGGCGCG TGAGCGCCGG TCCGGCGAAC TGGTGGTTAT TCCGGTTGCC
GGTGGGGCGG GCATCCGCAC ACCCATCGAT CTTTGCGTCG CCGGTGACCG GCAATTGTCG
TTTGCCGCTT CAAAGCTGGT GGATGCAGTT GAGCGGTTCA TGCGCGAGCA GATGGGGAAA
TGA
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| Protein sequence | MQIKALIYFD ELVRTRSMRA AAERLNVQPT AFARQIDQLE HYFGTVLIER SSRGIQLTAA
GELLAARAGK TLRELNHVHQ LIDDLQGLKR GHVTIHANGA TVANLLAPAL ADFSLVYPNI
RFSVTISSAG QAMEALSSAK ADMAVTLFSE PDPGIRVRAR AQIVYDVIAA SHHPAAHLAE
MTVTELARFP LAVPDGSFGA RRAFDAWFSK AGLELDPVFV TGSLEMQREL VLRGAALTLL
PAQTVARERR SGELVVIPVA GGAGIRTPID LCVAGDRQLS FAASKLVDAV ERFMREQMGK
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