| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5631 |
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| Symbol | |
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| ID | 7381107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 657192 |
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| End bp | 658217 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643649201 |
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| Product | ABC transporter nucleotide binding/ATPase protein (oligopeptide) |
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| Protein accession | YP_002547438 |
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| Protein GI | 222106647 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.215851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAGA CCGAAAAACC CCTGCTGCTT GATGTCAACG GCCTCAGTGT CTCCTTCGCC
ACTGATCGCG GCTATGTGCG GGCGGTGCGC GATGTGTCCT TTAGCGTGCG CGAAGGCGAA
ATCCTGTCTG TCGTTGGCGA ATCCGGCTCT GGCAAATCAG TGACGCTGTT GTCGCTGCTC
GGCCTGCATG ACCGCAAGAC CACGCGGGTG GACGGCACCG TCACGTTTCG CGGCCAGCGC
ATTCTGGAAA TGTCGGCGAG CCAGATGCGG CGCATTCGCG GCAAGCAGAT CGGCCTGATT
TCCCAGGACC CGATGACGGC GCTGAACCCG GTAAAAACCG TGGGCTGGCA GATCTCCGAA
CAGATCCGCG CCCATGAGCC GATCTCGGCA CGGGCCGCAC GGCTGCGGGC CATCGAGCTG
TTGGGCGAAG TCGGCCTGTC CAATCCGGGT GAAGCGGTGG ACCGCTATCC GCATCAGCTG
TCCGGCGGCA TGCGCCAGCG TGTCGTCATC GCCATGGCGC TCTCCTGTAG CCCGGCGCTG
CTGGTGGCAG ACGAACCGAC AACGGCGCTG GATGTCACCG TGCAGGCACA GGTACTTGAC
CTGTTGATCC GCTTGCGCAA GGATTTCGGC TCGGCGATCA TTCTCATCAC CCATGACATG
GGCGTGGTCG CCGAAGTCGC TGACCGGGTG GCGGTGATGT ATGCAGGCCG CATCGTTGAA
CGAGGCACGA CCGACCAGAT CTTCTCGACA CCCATGCATC CCTATAGCTG GGGCCTGATG
GCCTCGATCC CGCCTTTGAC CGGGCCACGC CTGAAGCGGC TGAAATCCAT TCCCGGCATG
CCGCCCACGC CAGACAGCCT GACGGAGGGC TGCGGCTTTG CACCGCGCTG TATGTTTGCG
CGGGAGGGCT GCGCAGCACA TCCGCCGCTG CGGCGCATGG GAGAACAATC GGCGCTCTGC
GTGCTGGACG GGCCGGAACG TGAGGCCCTT CGCCAAGACA TCCTGCCACT GGAGACCCTG
GCATGA
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| Protein sequence | MNQTEKPLLL DVNGLSVSFA TDRGYVRAVR DVSFSVREGE ILSVVGESGS GKSVTLLSLL
GLHDRKTTRV DGTVTFRGQR ILEMSASQMR RIRGKQIGLI SQDPMTALNP VKTVGWQISE
QIRAHEPISA RAARLRAIEL LGEVGLSNPG EAVDRYPHQL SGGMRQRVVI AMALSCSPAL
LVADEPTTAL DVTVQAQVLD LLIRLRKDFG SAIILITHDM GVVAEVADRV AVMYAGRIVE
RGTTDQIFST PMHPYSWGLM ASIPPLTGPR LKRLKSIPGM PPTPDSLTEG CGFAPRCMFA
REGCAAHPPL RRMGEQSALC VLDGPEREAL RQDILPLETL A
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