| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5630 |
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| Symbol | |
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| ID | 7381106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 656209 |
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| End bp | 657195 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643649200 |
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| Product | ABC transporter nucleotide binding/ATPase protein (oligopeptide) |
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| Protein accession | YP_002547437 |
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| Protein GI | 222106646 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.211649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGA CATCTCACAC CACGCCGCTG CTCTCGACTC AGGATCTCAC CAAGAGTTTC
ACTGTCGGCA AGACCATGCG TCCCGGCTCC GGCAAACTGC TACGCGCCGT CGAAGGCATC
AGCCTCGACG TCTATCCCAC GGAAACGCTG GGCCTGGTCG GCGAATCCGG CTCCGGCAAG
TCGACGCTCG GACGCTGCCT GACCCGCCTT TACGATGTCA GCGGCGGATC GCTGACGTTT
GACGGGCAGG ACATTACCAA GGTGGACGGC AAGGCGCTGA AATCGGTGCG GCGCAAGATG
CAGATGATCT TCCAGGACCC CTCCGCCTCG CTCAATCCGC GCCGCAAGGT GCGCGATGTA
CTGAGCGAAG TGCTGAAGGT TCACAAGATC CGCGAGGGTG CCGCTATCGA GGACCGGTTG
GCCGAACTGA TGGATCTCGT CGGGCTCCGG CGCGAATATC TCGATCGCTA TCCGCATGAA
TTTTCCGGCG GCCAGCGCCA GCGGATCGGC ATTGCCCGGG CCCTGGCGGT CGAGCCGAAG
ATGATTGTTG CCGACGAGCC GGTCTCGGCG CTCGATGTGT CGGTGCAGGC GCAGATCGTC
AATCTGTTCA GCGATTTGCG CGAAAAGCTC GACCTCACCT ATGTATTCAT CGCCCATGAT
CTGGCCGTGG TGCGGCAGGT CTCAACACGG GTGGCGGTGA TGTATCTCGG CTCCATCGTT
GAGATCGGCG ACACGGATGC GCTCTATGCC AATCCCAGCC ATCCCTACAC ACAGGCGCTA
CTCTCGGCCA TTCCGCAGCC GCATAAGCGC GACAAGCGCG AACGCATCCT GCTGACGGGC
GAGATTCCAA GCCCGCTCAA CCCACCAAGC GGCTGCAAGT TTTCCACCCG CTGTCCTTAT
GCGAAGGATA TCTGCCGCGA CCTGCGGCCA CCGCTGACGC CTGTCTCGGC AGAGCGCAAG
GTCGCCTGTC ATTTTCCGCT GGATTGA
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| Protein sequence | MSETSHTTPL LSTQDLTKSF TVGKTMRPGS GKLLRAVEGI SLDVYPTETL GLVGESGSGK
STLGRCLTRL YDVSGGSLTF DGQDITKVDG KALKSVRRKM QMIFQDPSAS LNPRRKVRDV
LSEVLKVHKI REGAAIEDRL AELMDLVGLR REYLDRYPHE FSGGQRQRIG IARALAVEPK
MIVADEPVSA LDVSVQAQIV NLFSDLREKL DLTYVFIAHD LAVVRQVSTR VAVMYLGSIV
EIGDTDALYA NPSHPYTQAL LSAIPQPHKR DKRERILLTG EIPSPLNPPS GCKFSTRCPY
AKDICRDLRP PLTPVSAERK VACHFPLD
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