| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5626 |
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| Symbol | |
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| ID | 7381102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 650044 |
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| End bp | 651624 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643649196 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547433 |
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| Protein GI | 222106642 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR02814] PfaD family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATCA ATGCGCGATT TGAAGACGCC TCCGCAACAC CCGCTATTGT CTGGGACACC
CCGTCAATCC GTCGGCAATT GCAGAAATTG GATCAGCCGG GCTCAGTGGT CAGCGATGGC
ACCCGGCTTG GGGTGACCTC GGAACTGGAG CCGCTGGAAG CCGGTTTCAA AGTGGTCTGC
CGCTATCCTG CCCTGGCGCC GAGTGCGCTG GGGGACCCGG ATTTCCTGGC CCGCTACGAT
CTGCGCTTCC CCTATATGGC TGGTGCCATG GCCAATGGCA TCGCCTCGCC GGACCTGGTC
ATTGCGCTGG CCCAGCAGGG TTTTCTGGCG AGCTACGGTG CAGGTGGCGT TCGGCTGGAA
CAGGTCGATC AGGCACTGGC CAAGATTACC TCGGCGCTTC AGGGCGCGCC ATTTTCGGTC
AATCTCATCC ATAGCCCCAG TGAACCGGCC ATGGAAAACG GCCTGATCGA TATTCTGCTG
CGCTATGGTG TCACCATTGT CGAAGCCTCG GCTTTCATGG GGTTGACGCC AGCACTGGTG
CGCTACCGGG CGCTTGGCCT TCGCCGCCGC GACGATGGCA GCATCGAGAT CGGCCATCGG
CTGATCGCCA AGGTCTCCCG CTCGGAAGTG GCCTCGGTCT TTATGGAGCC AGCGCCAGAA
AACATCTTGA AAAAGCTGCT GGCCCAAGGC GCGATCAGTG AGGAGCAGGC CGCGTTGGCT
GCCCAGGTAC CGATTGCCGA CGACATTACC GCTGAAGCTG ATTCCGGTGG GCATACCGAC
CGCAGACCGC TGGTCGTGCT GCTGCCGATC CTGCTGCGGC AGGCGCAGAA AGTGGCCGAG
AAAAACGGTT ACGCCAAGCC GATCCGCATC GGTGTCGGTG GTGGGCTTGG CTCGCCCAAG
GCAATTGCCG CCGCCTTTGC AACGGGTGCC GCCTATGTGG TGACCGGGTC GGTCAATCAG
GCCTGTCAGG AATCCGGCTC GTCGCCTTCG GTGCGCGCCC TTCTGGCCAA ATGCGGCTTT
GCCGATACGA CCATGGCACC GGCTGCTGAT ATGTTCGAGC TGGGGGTGGA GTTGCAGGTC
TTGAAGCGTG GCACGTTGTT CGCCAGCCGC GCCAAGATGC TCTACGATCT CTATCGCCGC
TATGACAGTC TGGATGCGCT GCCGGAGCCG GTGGTGCAGG AGCTGGAGCA GAAGCTGTTC
AAGCAGAGCC TTGCCGATGT CTGGCGGATG ACGGCGGATT ACTTCATTGG GCGCGACCCC
AAGCAGGTCA CGGAGGCGGA AGCCGATCCG AAGCGCAAGA TGGCACTGGT GTTTCGCGCC
TATCTCGGCA AGGCATCCCA TTGGGCCAAT GCCGGGGAAG AAGGCCGCCA GATCGACTAC
CAGATCTGGA GCGGCCCGGC GATTGGTGAC TTCAACGAAT GGACGGCTGG CACCTATCTG
GAACAGCCGG AGGGACGCCG CGTGGTGGAT GTCGCCACTC ATCTGTTGCA GGGCGCGGCC
TTTGAGACGC GGCTGCATTG GCTGGCCATG GCCGGTGTCC GCTTCCCCCA TCCGATGTCC
TATGAGATTG CGCCGCTATG A
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| Protein sequence | MTINARFEDA SATPAIVWDT PSIRRQLQKL DQPGSVVSDG TRLGVTSELE PLEAGFKVVC
RYPALAPSAL GDPDFLARYD LRFPYMAGAM ANGIASPDLV IALAQQGFLA SYGAGGVRLE
QVDQALAKIT SALQGAPFSV NLIHSPSEPA MENGLIDILL RYGVTIVEAS AFMGLTPALV
RYRALGLRRR DDGSIEIGHR LIAKVSRSEV ASVFMEPAPE NILKKLLAQG AISEEQAALA
AQVPIADDIT AEADSGGHTD RRPLVVLLPI LLRQAQKVAE KNGYAKPIRI GVGGGLGSPK
AIAAAFATGA AYVVTGSVNQ ACQESGSSPS VRALLAKCGF ADTTMAPAAD MFELGVELQV
LKRGTLFASR AKMLYDLYRR YDSLDALPEP VVQELEQKLF KQSLADVWRM TADYFIGRDP
KQVTEAEADP KRKMALVFRA YLGKASHWAN AGEEGRQIDY QIWSGPAIGD FNEWTAGTYL
EQPEGRRVVD VATHLLQGAA FETRLHWLAM AGVRFPHPMS YEIAPL
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