Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5619 |
Symbol | |
ID | 7381098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 634324 |
End bp | 634605 |
Gene Length | 282 bp |
Protein Length | 93 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643649192 |
Product | polyketide synthase |
Protein accession | YP_002547429 |
Protein GI | 222106638 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00123968 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGACG TTCAAACAAA GTTCAGCTAC GCAGAAGCCA AGACCTGGCT GGTCGAAAAA TTCGCTTACA AGCTTTCGGT TCCGGCATCG GAAATCGATG TGAACAAGAT CTTCACCGAT TTCGGCCTGG ATTCCACTGA AACCCTCGTG CTTGCAGGGG AAATGGAACA GTGGCTCGGC TTCGAATTGC CGCCGACGGC CATGTGGTAC CACCCGACCA TCGAAAAGTT GGCCAATTAT CTTGTCGAGG CCAAGGATCT CTTCGAAAAA GGCGAACTCT GA
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Protein sequence | MSDVQTKFSY AEAKTWLVEK FAYKLSVPAS EIDVNKIFTD FGLDSTETLV LAGEMEQWLG FELPPTAMWY HPTIEKLANY LVEAKDLFEK GEL
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