| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5611 |
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| Symbol | |
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| ID | 7381091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 626659 |
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| End bp | 627468 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649185 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002547422 |
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| Protein GI | 222106631 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGTGG GTAGGATCGA CTGGACGGGC CTTGCTTTCG CAGGCCTGCT CACCCTGTTT
ATCGCCCTGC CACTGCTGGT GGTCGGCACC TGGGCCTTTA CCGAGGTCTG GCGCTATCCA
TCAGTGATCC CGCAGCAATT CGGCCTGCGC TTCTGGTTCC TGACGCTTGG CCGCGCCGAC
GTCTGGGAAG CGCTCTTTCT CAGCCTGCGC CTCACCGCCA CGGTGACACT GCTGTCGGCG
GTGATCTGTC TTCCGGCCGC CTATGCCTTT GCCCGGATGA AATTTCCGGG CCGCAATCTG
CTTTTCCTGT CTTTTCTTGC CTCGCATGCC TTCCCCAAAT TCGGTCTGCT GGTGGCCATT
GCGGCGATTT TCCTGAAGCT GCATCTGATC AGCACCTTCT GGGGCGTGGC ACTGATTCAA
TTGGTCGGCA CGCTGATGCT CATGATCTGG ATACCGGTTG CCGCCTTCCA GAATGTAGAC
CGGCGAATGG AAGAAGCGGC GCGTGATGCG GGCGCCCGGC CCTTGCGGGT TTTCTGGTCG
ATTACGCTGC CGCAGGCGGC GCCGACCATC TTTGCCGCCC TGCTCCTGAC CTTCGTCAGC
ACGTTTTACG AAACAGAAGG CGCCTGGTTG ATTGGCGCGC CGCAGGTGCG CACCATGCCT
GTCTTGATGG TGTCCTTCAT CAACAATCAG ATGGTGGTGC AATATGGCGC GGTGCTGTCG
GTCATGCTGT GGGTTCCCTC CTTCCTCGCA CTGATCTTTG CCCGCCGCGC CATCGGCACA
GGCGCATTCG CCAAGGGCTT TGGCGCCTGA
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| Protein sequence | MRVGRIDWTG LAFAGLLTLF IALPLLVVGT WAFTEVWRYP SVIPQQFGLR FWFLTLGRAD
VWEALFLSLR LTATVTLLSA VICLPAAYAF ARMKFPGRNL LFLSFLASHA FPKFGLLVAI
AAIFLKLHLI STFWGVALIQ LVGTLMLMIW IPVAAFQNVD RRMEEAARDA GARPLRVFWS
ITLPQAAPTI FAALLLTFVS TFYETEGAWL IGAPQVRTMP VLMVSFINNQ MVVQYGAVLS
VMLWVPSFLA LIFARRAIGT GAFAKGFGA
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