Gene Avi_5596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5596 
Symbol 
ID7381076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand+ 
Start bp607468 
End bp607968 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content54% 
IMG OID643649170 
Producthypothetical protein 
Protein accessionYP_002547407 
Protein GI222106616 
COG category[S] Function unknown 
COG ID[COG3685] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.756785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAGA AAACATTGAA CGACCTGTTC CTGGATACGC TTAAGGACAT CTACTTTGCT 
GAGAAGCAAA TCTTGAAGGC CTTGCCGAAA ATGGCACGCG CAGCCCAATC GGAAGAGGGC 
CGGAACGCAT TTCTTCATCA TCGCGAAGAA ACCCAAGGCC AGATCGAGCG GCTTGAACAG 
GTCTTTGAAC TTCTGGGCAA GAATGCCCGG GGCAAGACCT GTGAGGCAAT CCAGGGCATC 
ATCGCCGAAG GCGAAGAAAT CATGGAGGAT TTCAAGGGGT CTTCAGCTCT TGACGCTGGC 
TTGATTTCGT CAGCGCAGGC AGTCGAGCAT TATGAAATTG CCCGCTACGG CACACTAAAG 
GCCTGGGCAC TGCAGCTCGG TATGAAGGAG GCCGCCGCCT TGCTCGATGC GACCCTAAAG 
GAAGAAATCG CTACGGACGA AAAGCTGACG GCGCTTGGCG AAGGTAGCGC CAACAAGAAA 
AGCGCACGCA AGGCAGCGTG A
 
Protein sequence
MAEKTLNDLF LDTLKDIYFA EKQILKALPK MARAAQSEEG RNAFLHHREE TQGQIERLEQ 
VFELLGKNAR GKTCEAIQGI IAEGEEIMED FKGSSALDAG LISSAQAVEH YEIARYGTLK 
AWALQLGMKE AAALLDATLK EEIATDEKLT ALGEGSANKK SARKAA