| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5588 |
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| Symbol | |
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| ID | 7381070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 599271 |
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| End bp | 600128 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649164 |
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| Product | dehydrogenase |
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| Protein accession | YP_002547401 |
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| Protein GI | 222106610 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.861783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGATA AACCGACGCC ACCCTTTTCC AAGCAACAAC AGTCTATTCC GGGACTGACC
CGCGACATGG ATCCCGTGCC GGATCACGGT GAAACGACCT ATAAGGGTTC GGGGCGGCTT
GCCGGCAAGA AGGCGGTAAT AACAGGTGCT GATAGTGGCA TCGGGCGCGC TGTGGCCTTG
GCTTATGCCC GAGAGGGTGC TGATGTGCTG ATCTCCTATC TCAGCGAACA TGAGGATGCC
GAGGAAACCA AGCGCCTTGT GGAAGAGGCA GGCCGCAAGG CCGTGCTGGT GGCGGGCGAC
TTGCAAAAGG CCGACCATTG CCGCCTCATT ATAGACAAGG CGGTTGCCGA GCTTGGCGGC
ATCGATATTC TCGTCAACAA CGCTGCCCAC CAAAAGACCT TCGAGCAAAT CGAGGATATC
AGCGATGAGG AATGGGAATT GACGTTCAGG GTCAATATCC ACGCGATGTT CTATCTGACC
AAAGCAGCCG TCAAGCATAT GAAGCCCGGT GCGGCGATTA TCAATACAGC CTCGATCAAC
GCCGATACGC CGAGCCCCAC TTTGCTGGCT TATGCAACGA CCAAGGGTGC TATCCAGAAT
TTCACGGCAG GCCTCGCCCA GCTTCTGGCG GAAAGAGGTA TCCGCGCCAA TACTGTTGCG
CCCGGCCCGA TCTGGACGCC ACTCATCCCT TCAACCATGC CGCCGGAACG GGTCTCGAGC
TTTGGCGAGC AGGTGCCGAT GAAACGACCG GGCCAACCGG CTGAACTTGC AACGGCCTAT
GTGATGCTGG CCGACCCGCT TTCAAGCTAT GTTTCCGGCG CCACCATCGC AGTCACCGGT
GGCAAGCCCA TTATCTAG
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| Protein sequence | MIDKPTPPFS KQQQSIPGLT RDMDPVPDHG ETTYKGSGRL AGKKAVITGA DSGIGRAVAL
AYAREGADVL ISYLSEHEDA EETKRLVEEA GRKAVLVAGD LQKADHCRLI IDKAVAELGG
IDILVNNAAH QKTFEQIEDI SDEEWELTFR VNIHAMFYLT KAAVKHMKPG AAIINTASIN
ADTPSPTLLA YATTKGAIQN FTAGLAQLLA ERGIRANTVA PGPIWTPLIP STMPPERVSS
FGEQVPMKRP GQPAELATAY VMLADPLSSY VSGATIAVTG GKPII
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