| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5575 |
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| Symbol | |
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| ID | 7381480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 584380 |
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| End bp | 585093 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643649152 |
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| Product | transcriptional regulator GntR family |
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| Protein accession | YP_002547389 |
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| Protein GI | 222106598 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.804429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGACGATA AAACGGTCGA CACGGAAAAA CCAATCCACA GGCGTGGCTA TGGAGTCTCG
ACAGTCTATG AGACTTTGCG CAATGAGATC ATTGAGCTGA CGCTGGCGCC CGGCAGTCCT
GTCGATGAGC AGCAACTGTC CGACCGCTTT TCCTTGTCGC GCACGCCGAT TCGCGAAGCA
CTGGTACGGC TTGCGGCCGA AGGCCTGATC ACTACGCTGA CCAACCGCGC CACCATCGTC
TCTTCCATAG ACTTTCTAGG CCTTTCGGAA TTTTTCGATG CGCTGACCTT GATGTATCGG
GTGACGACAC GGCTTGCCGC GCTCAATCAT ACGCCTGATC ATATCGAGCA GATCCTCCGT
TTCCAGGAGG TTTTCGCGGA GGCAGTCGAG AGGCGCGATG TGCTGGCGAT GATCGCCAGC
AATCGGGATT TCCATGTCGC CATCGCGAAG GCCGGCAAAA ACCGCTATTA CGAGGATCTT
TTTACGCGAT TGCTGGATGA AGGCCGCCGG ATTCTCCGAC TCTATTACTC ATCCTTCAAC
GATATGTTGC CAAGGCAATA TGTCACCGAG CATGAAGACA TGATCCAGGC AATCATCGAG
CGCGATGCCG AGCGCTCCGA TGCACTGGCT ACCGCCCATG CCGACCAGAT TGTGCGGCAG
ATCCGTTCCT ATATCACCGC CGATGGAAGA CAGACCGTAA ATCTCAAGCT TTGA
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| Protein sequence | MDDKTVDTEK PIHRRGYGVS TVYETLRNEI IELTLAPGSP VDEQQLSDRF SLSRTPIREA
LVRLAAEGLI TTLTNRATIV SSIDFLGLSE FFDALTLMYR VTTRLAALNH TPDHIEQILR
FQEVFAEAVE RRDVLAMIAS NRDFHVAIAK AGKNRYYEDL FTRLLDEGRR ILRLYYSSFN
DMLPRQYVTE HEDMIQAIIE RDAERSDALA TAHADQIVRQ IRSYITADGR QTVNLKL
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