| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5570 |
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| Symbol | thuB |
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| ID | 7381478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 582202 |
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| End bp | 583302 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649150 |
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| Product | trehalose utilization-related protein |
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| Protein accession | YP_002547387 |
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| Protein GI | 222106596 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.541955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACAC CCGTCCGTAT TCTCATTCTC GGTACCGGTG GCATGGCGAA CCGCCATGCC
ATCGAGTTTG CCACCAATAG CGACGCCCAA CTGGTCGGCG CCGTCGATGT CGATATCGCC
AAGGTACGTG GTTTTGCGCT GCGCCATGAT ATCGCCAATA CATTCACCTC GCTGGAGGAC
GCGCTTGCCT GGGGTGAGTT CGATGCCGTC GCCAATGTGA CGCCCGACCG GGTGCATTAT
CCGACGACAC TGCAATTGAT CGCGGCGGGC AAGCATGTGT TTTGCGAAAA GCCGCTGGCT
GAAAGCTTTG AAAAAGCTGA TGAGATGGCC CGCAAAGCCA ATGCCGCTGG ACTGGTGAAC
ATGGTCAACC TGACCTATCG CAATGTCGCG CCGGTACAGA AAGCACGACA GCTGGTTCAG
GCTGGTGAGA TCGGCAAGGT CCGTCATATC GAGGCCTCCT ATCTGCAAAG CTGGCTGGTG
TCCAAGGCCT GGGGCGACTG GGCAACCGAG GACCAATGGC TATGGCGGCT ATCCACCAAG
CACGGCTCAA ACGGGGTGCT CGGCGATGTC GGCATCCATA TTCTCGATTT CGCCAGCTAT
GGCGCGGCAA CCGATGTCGA GCATATCTTT GCGCGGTTGA AGACATTTGA GAAAGCGCCG
GGCAACCGGA TTGGCGACTA TGATCTTGAC GCCAATGACA GTTTCACCAT GACGGCGGAA
TTCAGCAATG GCGCCATCGG CGTCGTGCAC GCCTCGCGCT GGGCAACCGG CCACCTTAAC
GAATTGCGCC TGCGCATGCA TGGCGACAAG GGCGCATTGG AGGTGATCCA CACGCCAACG
GGCAATACAT TGCGCGCCTG CATGGGCGAC GATGTGGAAA AAGGCATTTG GACGGAAGTG
GATGCCGGCA CCGTTGCCAC CAATTACCAG CGCTTCGTCG AGGCGGTGCT GGAGGGCAAA
ACCCGCGAAC CTGACTTCCG CCATGCGGCT GACCTGCAAA AAGTGCTGGA TCTGGCGATG
GTGACAGAGT TGGAGCGGCG CGAACATTCC GTTCGCCGTG TTGATGCGGC ACCTTCGCTG
GCTGCGGTAT CATCAAGGTG A
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| Protein sequence | MNTPVRILIL GTGGMANRHA IEFATNSDAQ LVGAVDVDIA KVRGFALRHD IANTFTSLED
ALAWGEFDAV ANVTPDRVHY PTTLQLIAAG KHVFCEKPLA ESFEKADEMA RKANAAGLVN
MVNLTYRNVA PVQKARQLVQ AGEIGKVRHI EASYLQSWLV SKAWGDWATE DQWLWRLSTK
HGSNGVLGDV GIHILDFASY GAATDVEHIF ARLKTFEKAP GNRIGDYDLD ANDSFTMTAE
FSNGAIGVVH ASRWATGHLN ELRLRMHGDK GALEVIHTPT GNTLRACMGD DVEKGIWTEV
DAGTVATNYQ RFVEAVLEGK TREPDFRHAA DLQKVLDLAM VTELERREHS VRRVDAAPSL
AAVSSR
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