| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5566 |
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| Symbol | |
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| ID | 7381474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 577396 |
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| End bp | 579210 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649146 |
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| Product | 4-alpha-glucanotransferase |
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| Protein accession | YP_002547383 |
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| Protein GI | 222106592 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.163065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCCAA TCATGACGTC AATGATCAAC AGACTTGCCA AGAAACATGG GATCAACCTC
GCCAGACCGG GAATAGAACA GGCGGAAGTT CCGATTTCAG ACGTCACAAA ACGTCGGTTG
TTGGCGGCTC TCAACGTGGA AGCGGGTGAG CCTGGTCGCA GCTATCTGCC CGATTGCCTT
GCTCGAGATC GTGTCTGGGG CATCAGCCTG CAACTTTATG AACTGCGATC AGTGCGCAAT
TGGGGGATTG GCGACTTTGC CGATTTGCAG AGCATGGTGA TGCTTGCCGC CGATCAAGGT
GCCGATTTTA TCGGGCTTAA CCCGCTGCAC GCGCCTTTTC TGGCCGACCC CGCCCGGTGC
AGTCCCTATG AGCCATCCAA CCGGCGCTTT CTCAATCCGC TTTATATCGC TGTCGATCTG
GTGCCGGGTT ATCATCCAGG CATGAGCGAC AGAGAGACGC TCGACGCTTT ACGGCGATCC
AAACTTGTCG ATTACAAAGC GGTCGCCGGT GTGAAGCTTG AGGTTCTGCG GCGGATCTGG
GACGGTTCAA GACGGTTGGA GCGAAACGAC GATCAGGACA GAGCCGATTT CAGGCGTTTC
TGCGATGAAA GCGGTGATGC TCTACAAAAT CACGGTCTCT TCGAGGCTTT ATCCCGATTC
ATGAGCGAAG GTGGCCATGG TGCAGGCTGG ATGTCCTGGC CTGGGGAGTA TCAGGATATC
GATCATCCCT CCGTTCGGGC CTTCCGTAGC CAGAATGCCG AGGAGATCGC ATTTCATGTG
TGGCTTCAAT GGGTCGCGCA CCGGCAGCTG GAGACGGTTG CTGCCCAAGC GCGCAAAGCG
GGCTTGAGAA TTGGCCTTTA CCTCGACCTC GCGGTCGGCG AAGCGTTGGA TGGTTCGGCG
ACCTGGAGCG AACCGGATAT CTATCTGCGC GGCGCCAGCA TCGGCAGCCC GCCCGATCCT
TGGGCGGTCA AAGGCCAGGA TTGGCGGTTG GCCGCCTTGC AGCCGGCGTT GATCGCCTTT
TCTTGCCGCT CGCCCTATCG TCAGATGATC GATGTCGCGA TGCGCTATGC GGGTGCGGTG
CGTATCGATC ATGCCGCCGC CATTCAGCGA TTGTTCCTGG TGCCAGCCGA TATGGGGCCG
GAGGAGGGGG CCTATGTCGA TTATCCCGCC CGCGAGATCC AGGGCGTGAT TGCTGAAGCC
TCCTTGCGCA ACCAATGCCT GGTCATTGGC GAGGATCTCG GTCTGGTGCC GTCTGGACTA
AGACAGCAGA TGGTGGATGC CAATCTCCTG TCCTATCGCA TCCTGTCTTA TGAAAGAGAC
AAGCGCGGCT TTATTGCGCC GGACAAATAT CCGGTTATGG CGCTTGCCTG CGTCTCGACC
CACGATCACC AAACGTTGGT GGGATGGTGG CGCGGTGCCG ATATCGAAGC ACGCGCGGCC
CATGGATTGG TGCCGGAAGC GGCAAGACTC CAGGAGCAGG CCGCCCGCAT TCAGGAACGA
GCCGACCTGC TGCGAGCCGT TGCGTTGGCT GGGATAGAGT TGCAAGAACA TGGTGTCGAA
CAGCCGGATC TGCATGAGCG CGTCGTGGCG GCTCATCGGT TTATGGCGAA AACAGCCTCC
ATGCTGGTCT CTGTCCGGCT TGCCGACCTT ACCGACGAGG AAAACCCGAC CAATATTCCG
GGAACCAGCA GTAGCTATCC CAATTGGCAG CCGAAGCTCT CGGTCGCCTG TGAGGATCTC
ACCGGGTTCA CCCTTTTCAA TCGGATCGTC GACGCCGTCC GAGAGGAAAG ACCCAAAACA
AAAGAGGGTA GCTAG
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| Protein sequence | MDPIMTSMIN RLAKKHGINL ARPGIEQAEV PISDVTKRRL LAALNVEAGE PGRSYLPDCL
ARDRVWGISL QLYELRSVRN WGIGDFADLQ SMVMLAADQG ADFIGLNPLH APFLADPARC
SPYEPSNRRF LNPLYIAVDL VPGYHPGMSD RETLDALRRS KLVDYKAVAG VKLEVLRRIW
DGSRRLERND DQDRADFRRF CDESGDALQN HGLFEALSRF MSEGGHGAGW MSWPGEYQDI
DHPSVRAFRS QNAEEIAFHV WLQWVAHRQL ETVAAQARKA GLRIGLYLDL AVGEALDGSA
TWSEPDIYLR GASIGSPPDP WAVKGQDWRL AALQPALIAF SCRSPYRQMI DVAMRYAGAV
RIDHAAAIQR LFLVPADMGP EEGAYVDYPA REIQGVIAEA SLRNQCLVIG EDLGLVPSGL
RQQMVDANLL SYRILSYERD KRGFIAPDKY PVMALACVST HDHQTLVGWW RGADIEARAA
HGLVPEAARL QEQAARIQER ADLLRAVALA GIELQEHGVE QPDLHERVVA AHRFMAKTAS
MLVSVRLADL TDEENPTNIP GTSSSYPNWQ PKLSVACEDL TGFTLFNRIV DAVREERPKT
KEGS
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