| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5549 |
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| Symbol | |
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| ID | 7381458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 547439 |
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| End bp | 548443 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643649130 |
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| Product | NAD binding oxidoreductase |
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| Protein accession | YP_002547367 |
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| Protein GI | 222106576 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.438473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC TCAGATGGGG CGTGCTGGGA GCCGCCAATA TTGCCATCAA GGCCGTTATT
CCGGCCATTC AGGCGGGCGA AACGGGCATT GTTGCGGCAA TTGCGTCGCG CTCACTGGCA
AAAGCTCAGA GTGTTTCGGC AGACCTTGGC ATTGCCAAAG CCTATGGCAG CTATGAGGAA
TTGCTCCGCG ATCCCGATAT CGATGCCATC TATAATCCGG TGCCCAATCA CCTGCATATG
CCGATGACGC TGGAAGCCAT CCGCCACGGC AAGCCCGTGC TGTGTGAAAA GCCAATTGCC
CTTACGGCAG AGGAAGCAGA GCAGATTGCT TCAGCTTCCA GCACTTCCGG TGTGCTGGTC
GCAGAGGCCT TCATGGTGCG CCATCATCCG CAATGGCTGA AGGTGCGTGA TCTGGTGAAA
GCCGGGCGAA TTGGCGAGGT GCGGAGCATC CAGACGATCT TCTCCTATTA TCTCGATGAT
CCCACCAATG TGCGCAACCA GAAAGATATT GGTGGCGGCG GACTTTATGA TGTCGGCTGT
TACGCCATCA ATACCGCCCG CTTTGTGTTT GATGGTGAGC CAGAGCGTGT GATTGGCCTG
TTTGATCAGG ATGAGACATT CCAGACGGAC AGGATGATGA GTGGTTTGGC GGAATTCTCC
GCCAATCGCC ACCTCACGTT TACCTGCGCC ACGCAGCTAT CCTTATGCCA GAAGGTCACG
GTGCTCGGCA CCAAAGGCCG CATAGAAATT GCCATTCCCT TCAATGCACC AACCGATGCA
CCCACCACCA TCACCATCGA TGATGGCCGT GACCTGACCG GTGGCGGCTG TGAAGTGATC
GAGATCAGCG CTGCCAATCA ATATGGCCTG CAATGCGATG CCTTTGCCCA TGCCGTGCTG
GTGGGTGAGC CTTTGTCATC CGGGCTAGGC GATGCCGTGG CCAATATGAA GGTCATCGAT
GCGTTTTTCC GCTCAAAGGC AAGCAATGGC TGGGAAAAGC CCTGA
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| Protein sequence | MKKLRWGVLG AANIAIKAVI PAIQAGETGI VAAIASRSLA KAQSVSADLG IAKAYGSYEE
LLRDPDIDAI YNPVPNHLHM PMTLEAIRHG KPVLCEKPIA LTAEEAEQIA SASSTSGVLV
AEAFMVRHHP QWLKVRDLVK AGRIGEVRSI QTIFSYYLDD PTNVRNQKDI GGGGLYDVGC
YAINTARFVF DGEPERVIGL FDQDETFQTD RMMSGLAEFS ANRHLTFTCA TQLSLCQKVT
VLGTKGRIEI AIPFNAPTDA PTTITIDDGR DLTGGGCEVI EISAANQYGL QCDAFAHAVL
VGEPLSSGLG DAVANMKVID AFFRSKASNG WEKP
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