| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5544 |
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| Symbol | |
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| ID | 7381454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 540688 |
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| End bp | 541728 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643649126 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547363 |
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| Protein GI | 222106572 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1162] Predicted GTPases |
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| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGCGGTATC GCATTTTGAC CGCCCCCTTG CTTGCAACGC TCGGCTGGTC GGAGTTTTTT
GCAGACCAGA TCGGCCAGGA TGAATCGGCA CTGACGCCCT GGCGTATCGC CTCCGTTCAC
CGCGCGCGGG TTGAAGCGAT CCATGCTGAC GGACACGGTG ATCTCGGACT GCCTCACCAC
AGCAATACAG CCGATTTCGC GGTGGGAGAC TGGGTGCTTG CCAATCCGGT AACCGGGGAA
TTTGTCCGCC GGCTGGAGCG TAAAACCGTC TTGCAGCGGC GCACGGAAGG CCGCAACGGC
CAACAGCTTG CCGCTGCCAA TGTCGATACG CTGTTTATCG TCACGTCCTG CAATGCAGAT
TTCAATCCGG CCCGGCTGGA GCGCTATCTG GTCATGGCCA ACCAGTCCGG CGCCAATCCG
GTCCTGGTTT TGACCAAGGC CGATACGGTT GACGATGCTC AAAGGTTCGT TGATGAGGCA
GCAGGCCTGC AACGCGACCT GCCCGTGGTC ACGGTCAATG CCCGCGCCCC GGATGCCGCA
GCAGCGCTTG CGCCCTGGTG CGGCATCGGC GAGACAGTCG CCCTTGTCGG CTCGTCGGGG
GTTGGAAAAT CGACGCTGGT CAACACTTTG GCGGGTTTGG AGACGGGAGC CGGTTCGGAA
ACGGGCCTGC CCCAGAAAAC TGGCGGCATC CGCGAGCACG ATGCCAAGGG ACGTCATACA
ACGACGGCGC GATCTCTGCA TGCCATCAGC GGTGGCGGCT GGGTCATCGA CACGCCGGGA
ATTCGCACGC TCTATGTCAG CGACGTGACG GATGGGCTCG ATACCTTGTT CAGCGAAATT
ACCGAACTTG CGCCGCAATG CCGTTTTCGC GACTGCACCC ATGCCCATGA GCCCGGCTGC
GCCGTGCAGG CGGCCATTGC CAAGGGCGAA CTGGCACCTG AACGCCTGGA GCGCTGGCGT
ATCCTTCTAA CGGAAAGCCG CAAGAGGACG CCGGTGACAA CCGGGCCACG TGGCAATAAA
ATCCCGCGCA AAGGAAAATA A
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| Protein sequence | MRYRILTAPL LATLGWSEFF ADQIGQDESA LTPWRIASVH RARVEAIHAD GHGDLGLPHH
SNTADFAVGD WVLANPVTGE FVRRLERKTV LQRRTEGRNG QQLAAANVDT LFIVTSCNAD
FNPARLERYL VMANQSGANP VLVLTKADTV DDAQRFVDEA AGLQRDLPVV TVNARAPDAA
AALAPWCGIG ETVALVGSSG VGKSTLVNTL AGLETGAGSE TGLPQKTGGI REHDAKGRHT
TTARSLHAIS GGGWVIDTPG IRTLYVSDVT DGLDTLFSEI TELAPQCRFR DCTHAHEPGC
AVQAAIAKGE LAPERLERWR ILLTESRKRT PVTTGPRGNK IPRKGK
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