| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5510 |
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| Symbol | |
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| ID | 7381426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 504834 |
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| End bp | 505712 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649098 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_002547335 |
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| Protein GI | 222106544 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGT CTTCCCTTCG TGTCTCGCTT GCAGCCAGGG GAATAGACGG CACGACGCTG
CTGGTCCTGC CGGGCTTGCT GGTCATTCTC GCCCTGTTCA TCTATCCGTT CATGTATGGC
GTGGTTGACT CACTGACGCC CGCGGACGGC GCATGGTACG CCAATTACGT CACCTTCTTC
ACCGATCCGT TTCAATACAA GACCATTTCC GCCACGCTTT GGCTGGCGCT GCCGGTCACG
GTGGTTAATC TGGCGCTTGC CTTGCCAATT GCCTTCCGGG TGCGGCTGAT GACGCGCCAG
CGTTTTCTGA CCACCATTCT GGTGCTGCCG GTCACGCTCG GCACCGTCTT CATTGCGGAC
GGTCTTTTGA CCTTTCTTGG TCCCCAGGGC TGGTTCAACC GCAGCCTGAT CCTGATCGGC
ATTCTCGATA CGCCGGTCAA GCTCACCAAC AATTACTGGG GCGTGTTTGC CTCGCTGCTG
ATCTCAGGTT TCCCCTTCGC CTTCCTGCTG ACGCTCTCCT ATGTCACCGG CATCGATCCG
GCCATCGAAC AGGCGGCGGC GACATTGGGG GCCAATGCCC GCAAGCGCTT CATGAACGTA
TTTCTGCCGC TGCTGGTGCC GGGTCTTGCC GTCACCTTCT GCCTGTCCTT CGTCCAAGCC
TTCGCGGTGT TTCCGTCCGC CGTTCTGCTT GGCGCACCCG CCGGGCCGAC GCGGGTGATT
TCGATTGCCG CCTATCAGGC CGCCTTCGAG CAATATAACC ACTCGCTGGG CTCGGCCATC
GCCATCATCA TGGGCGTTAT CGAGCTGGCA ATCGTCGCGG CCATCCTGGC ATTGCGCTCC
CTCTTCTATC GCGGCCCCGT CGCCGGAACG AAAGGCTAG
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| Protein sequence | MSQSSLRVSL AARGIDGTTL LVLPGLLVIL ALFIYPFMYG VVDSLTPADG AWYANYVTFF
TDPFQYKTIS ATLWLALPVT VVNLALALPI AFRVRLMTRQ RFLTTILVLP VTLGTVFIAD
GLLTFLGPQG WFNRSLILIG ILDTPVKLTN NYWGVFASLL ISGFPFAFLL TLSYVTGIDP
AIEQAAATLG ANARKRFMNV FLPLLVPGLA VTFCLSFVQA FAVFPSAVLL GAPAGPTRVI
SIAAYQAAFE QYNHSLGSAI AIIMGVIELA IVAAILALRS LFYRGPVAGT KG
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