| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5506 |
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| Symbol | ugpA |
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| ID | 7381423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 501492 |
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| End bp | 502382 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649095 |
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| Product | ABC transporter membrane spanning protein (sn-Glycerol-3-phosphate) |
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| Protein accession | YP_002547332 |
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| Protein GI | 222106541 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAAC GCGCCGTTTT CAAGAACTGG TGGCTGCCTA TTCTGTTTGC GCTGCCGCAG
ATCATCCTGA TCATCCTGTT CTTCTATTGG CCGGTGGCTG CCGTGGTGAA CTGGGCCTTC
ACCCTTGAGC CTCCGTTTGG CGGCGTGGCG GAATTTGTTG GCTTTGCCAA TTTCAAGGAC
GCGCTGACCG ATCCCTTTTA CTGGAATTCA GTTTATGTCA GCTTGATCTT CGCGACAGTC
GGGCCGTTCT TCGCCATTCT CATCGGCCTT GTGCTGGCAC TTGCGGTCGA TAGGCAACTG
CCGGGAACCG GCTTCTTTCG GTTTTTCTAC ATCCTGCCCT TCGCCATTGC CGGACCGGCT
GCCGGTATCG CCTTCCGCTT CATCCTGGCA CCCGATCGCG GGCTGGCGGC CATGGTCAAT
TCCTTCTCTC CAGATCTGTG GAATCCGGCC AAATACGGCA GCCATGCGCT GGCGCTGGTT
ATCATCGTCT TCATCTGGAA ATGGTCGGGC TATACGTTCA TCTTCCTGCT GGCAGGCCTG
CAATCGGTGC CACACGCCCT GAGTGAAGCC GCCGCCATGG ACGGCGCCGG TCCCTTTCGC
CGCGCATTCG ACGTGCAGGT GCCGCTGCTT GCGCCCACCC TGTTTTTTCT GCTCGTCACC
ATGATGACGG AAGGCTTCGT TGGCGCCGAC ACATTCGGCA TCGTCCATTC GATGACCGGC
GGCGGACCGA ACCACGGCAC CGAAGTCATG GTCTACCGGA TCGTCGATGA GGCGTTCAAG
GGTCTCAACT ATTCCGGCGC ATCGGCCCAA AGCATCATTC TGATCGGGCT GATCATGATC
TGCACCTTCA TCCAGTTCCG CTTCATCGAG AAGCGCGTGC ATTACAAGTG A
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| Protein sequence | MEQRAVFKNW WLPILFALPQ IILIILFFYW PVAAVVNWAF TLEPPFGGVA EFVGFANFKD
ALTDPFYWNS VYVSLIFATV GPFFAILIGL VLALAVDRQL PGTGFFRFFY ILPFAIAGPA
AGIAFRFILA PDRGLAAMVN SFSPDLWNPA KYGSHALALV IIVFIWKWSG YTFIFLLAGL
QSVPHALSEA AAMDGAGPFR RAFDVQVPLL APTLFFLLVT MMTEGFVGAD TFGIVHSMTG
GGPNHGTEVM VYRIVDEAFK GLNYSGASAQ SIILIGLIMI CTFIQFRFIE KRVHYK
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