| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5505 |
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| Symbol | ugpE |
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| ID | 7381422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 500597 |
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| End bp | 501484 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649094 |
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| Product | ABC transporter membrane spanning protein (sn-Glycerol-3-phosphate) |
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| Protein accession | YP_002547331 |
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| Protein GI | 222106540 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCAGC GCACACCGAT TGCCAATGCC TTCACCTACC TCATCATGGT CCTGGGCTTC
CTGCTGCTGA TCGGACCATT CATCGTGGTA ATTGCCGGTG CCAGCCAGAC AATGCCGCAG
GTCAATGCCG TTCCCTTCAG CTTCCTGCCG CAAGGCGAGT TCCTGACCAA TGCCAAACAG
GCCTGGTCGC GGGCCGATCT CGGCACGGCG ATGACCAATA GCCTGATTAT GGCGGCCCTG
GTGACGCTCG GAAAGGTCGC GCTGTCAGCC ATGACCGCCT TTGCCATCGT GTTTTTCCGC
ACGCCGCTGA AACACGTGTT TTTCTGGGGC GTGTTCATCA CCCTGATGCT GCCGCTCGAA
GTCCGGGTCG TCCCGACCTA TGCGGTGGCA GCCGACCTGT TGCAGCCGGT CAAATCCATC
CTGTCCACGC TGTTTGGCAT CGACATCAAG ATCGAGTGGA ACCTGCTCAA CACCTATGCG
GGCCTGACCC TGCCGCTGGT CGCCACGGCA ACCGGCACCT TTCTCTACCG GCAATTTTTT
ATGACTCTCC CCAATGAATT GGCCGAGGCG GCGCGCATGG ACGGGTCCGG GCCGATCCGC
TTCTTCTTTG AAATGCTGCT GCCGCTCTCG CGCACCAACA TGCTGGCGCT GACCACCATC
ATGTTCGTCT ATGGCTGGAA CCAGTATCTC TGGCCACTGC TGATGGTCAC GGATCCGAAC
TACAAGACGG TGATGATGTC CCTGCGTTCA CTGCTGCCGT CCGATAACGG CATCCCCGAT
TGGAACGTCA CGCTGGCGGG TTCCCTGATG ATCATGGCCC CGCCGCTGGT TGTGGTTGCC
GTGCTGCAAC GCTGGTTTGT GCGCGGTCTG GTCTCCACGG AAAAGTGA
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| Protein sequence | MIQRTPIANA FTYLIMVLGF LLLIGPFIVV IAGASQTMPQ VNAVPFSFLP QGEFLTNAKQ
AWSRADLGTA MTNSLIMAAL VTLGKVALSA MTAFAIVFFR TPLKHVFFWG VFITLMLPLE
VRVVPTYAVA ADLLQPVKSI LSTLFGIDIK IEWNLLNTYA GLTLPLVATA TGTFLYRQFF
MTLPNELAEA ARMDGSGPIR FFFEMLLPLS RTNMLALTTI MFVYGWNQYL WPLLMVTDPN
YKTVMMSLRS LLPSDNGIPD WNVTLAGSLM IMAPPLVVVA VLQRWFVRGL VSTEK
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