| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5495 |
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| Symbol | |
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| ID | 7381415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 492281 |
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| End bp | 493057 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649087 |
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| Product | cyclase |
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| Protein accession | YP_002547324 |
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| Protein GI | 222106533 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1878] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.245157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAGA TTATCGATCT GTCCGTTGCT ATCGAAAACG ACATTCCTGC CGATCCGCCG
GGCCTTGGTC CCAAAATCAC CTACACGAAC CATGCGGAAG GCTCGGAAGA GGTTTTGCGC
TTCTTTCCCG GGCTCGACAT TGGCGATGTT CCCGGTGGGG AAGGCTGGGC AGTCGAACAG
CTGAACCTGA CCGCCCATGC CGGTACGCAT CTCGATGCGC CCTGGCATTT CGCCTCAACG
ATGAATAATG GCGAGCGCGC CTGGACCATT GATGAAGTGC CGCTGGACTG GTGCATCCGT
CCGGGCGTCA AACTGGATCT GCGCCATCTG CCGGACGGCT CAATCGCAAC GGCAGCCGAT
CTTCAGTCAG CTCTGGAGGT CGCAGGCCAT ACACTCCAGC CTTTTGATGT GGTGCTGGTC
AACACCGCCG CCGGTGCCGC CTATGGGCGA CCGGATTATC TGGGCCGTGG CTGTGGCATC
GGACGCGAGG CCACCCACTG GCTTATGGCG CAAGGCGTCC ACATCGCTGG AACCGACGCC
TGGTCCTGGG ATGCGCCCTT TCCGGTCACC GCCAAACGGT TTGCGGAAAC CAGGGATGCA
GGGTTGATCT GGGAAGGACA TAAAGCCGCC CGTGAAGGTA TTTTCCTGCA TATGGAAAAG
CTGACACGGC TGGAGGAATT GCCGGGCTCC GGCTTCACCG TCTCCTGCCT GCCTGTGAAG
ATCAAGGGCG GCTCGGCTGG CTGGTGCCGT GCAGTGGCGA TTTTCCCGGA GGGTTAA
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| Protein sequence | MMKIIDLSVA IENDIPADPP GLGPKITYTN HAEGSEEVLR FFPGLDIGDV PGGEGWAVEQ
LNLTAHAGTH LDAPWHFAST MNNGERAWTI DEVPLDWCIR PGVKLDLRHL PDGSIATAAD
LQSALEVAGH TLQPFDVVLV NTAAGAAYGR PDYLGRGCGI GREATHWLMA QGVHIAGTDA
WSWDAPFPVT AKRFAETRDA GLIWEGHKAA REGIFLHMEK LTRLEELPGS GFTVSCLPVK
IKGGSAGWCR AVAIFPEG
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