Gene Avi_5487 details

Gene Information

• Locus tag: Avi_5487
• ID: 7381407
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011988
• Strand: +
• Start bp: 485336
• End bp: 486016
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 643649079
• Product: hypothetical protein
• Protein accession: YP_002547316
• Protein GI: 222106525

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.216197
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCATCA AACTTATGCT CTGTGGCCGT CGGCGGTTGG GCCAGACTCT TGCCGAACAA 
CGTGCACACA TGAAGGACCA TCACGGCAAG CTTGTGCTGG ATTATATTGC ACATGATCCG 
GTGACAGCAC CGCAGCGCTA TGTTCAAAAC CATGCTTTCG ATGGCGTCTA TTTTGGTGGG 
GAGCCGCAGG TCAAGGCACT GTCGATTGGT CTGGATTTCG TCACCGAGGT CTGGGCTCAG 
GATCTGGCAG GATTGAAGGC GTCACGCGAG ACGCCGTTCT ATCTGCAAAA TCTCAAGCCC 
GACGAGCCGG AAATGGTCGA TCACGATACT CTCATCGGCT TACCCTACTC GGAAGAGATA 
ATCATTCCGG TGCAGTCGCG TGAAGGTGCC GTGAAAGTAT TCCTGGCCTG GTTTGGCGAA 
ACGCCAGACG TCCATGCTGT TTTGGATGTG ATCGACACGG CTTCTCACGG ATTGCTCGGA 
TATTCCCGCA ACACACCATT GTTTCCCGGC CCGGTCGCAG CCATCGATGA ATATTGGCTG 
CCGAATGAGG GTGCTGGCGT CGCCTTCACA AAAGCCTGCC GCGACGCCAT CAACGGGCTT 
CGCCCCGGCG ATACCAGCTT TAGCCTGACC ATTGCCCGCG AATATGTTCT CCACGCTGGT 
CACCTAGACC TCGCAAAATA A 

 

Protein sequence

MTIKLMLCGR RRLGQTLAEQ RAHMKDHHGK LVLDYIAHDP VTAPQRYVQN HAFDGVYFGG 
EPQVKALSIG LDFVTEVWAQ DLAGLKASRE TPFYLQNLKP DEPEMVDHDT LIGLPYSEEI 
IIPVQSREGA VKVFLAWFGE TPDVHAVLDV IDTASHGLLG YSRNTPLFPG PVAAIDEYWL 
PNEGAGVAFT KACRDAINGL RPGDTSFSLT IAREYVLHAG HLDLAK