| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5467 |
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| Symbol | |
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| ID | 7381558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 467837 |
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| End bp | 468664 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649065 |
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| Product | ABC transporter nucleotide binding/ATPase protein (aliphatic sulfonate) |
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| Protein accession | YP_002547302 |
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| Protein GI | 222106511 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0163214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAA CAACAGTGAC GCGGCTTCGG CCAATTCAGG AAGCACATCC TGCAACAAGA
CAGGAACAGG CATCCCAACC GGTGCTTGCC AGCGCCCGCC CGGCTTTTTC CTTCCGCAAT
GTCCGAAAGA GTTTCGGGAC ACAGACCGTG CTTGATGGCA TAAACCTCGA TGTCGCCGAA
GGTGAGTTCC TGGCGATCAT CGGCAAGAGC GGCTGTGGCA AAAGCACCCT GCTGCGGTTG
CTGGCCGGGC TGGACAAACC AAGTTCCGGC GAACTTATCC ATCATGCCGA CAAGAGCGAT
GCTGCCCGGG TTCGAATGAT GTTTCAGGAA CCGCGTCTTC TGCCCTGGGC AAAGATCGAC
GACAATGTCG CCGTCGGACT GACCGGAATT GCCAAGGGCA AGGAAGCGCT TTCGGCGGCC
CGCGCCCTGT TGGAAGAGGT CGGCCTTGGC GCACGGGCCA GCGAATGGCC CTCCGTTCTC
TCAGGCGGCC AGAAACAGCG CGTCGCGCTT GCCCGCGCCT TGGCGGCGCA TCCGCATATC
CTGGCGCTGG ATGAACCGCT GGGCGCGCTC GATGCCCTAA CCCGGATCGA AATGCAGCAA
TTGCTGGAAC GGATCTGGCA AAAGCAACGG TTCACGGCGG TGCTGGTCAC CCATGACGTG
TCGGAAGCCG TCGCCCTCGC CGATCGGATC GTCGTCATCG ACGCCGGACG CATTGCGCTC
GATCTCAAGG TTTCACTGCC ACGCCCAAGG CGGCATGCCA CGGCAGAATG CGCGGCAATC
GAAGCACAGA TATTGGGGAA ACTGCTGGGA GAAGCGGCCC AAGCGTGA
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| Protein sequence | MTATTVTRLR PIQEAHPATR QEQASQPVLA SARPAFSFRN VRKSFGTQTV LDGINLDVAE
GEFLAIIGKS GCGKSTLLRL LAGLDKPSSG ELIHHADKSD AARVRMMFQE PRLLPWAKID
DNVAVGLTGI AKGKEALSAA RALLEEVGLG ARASEWPSVL SGGQKQRVAL ARALAAHPHI
LALDEPLGAL DALTRIEMQQ LLERIWQKQR FTAVLVTHDV SEAVALADRI VVIDAGRIAL
DLKVSLPRPR RHATAECAAI EAQILGKLLG EAAQA
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