Gene Avi_5463 details

Gene Information

• Locus tag: Avi_5463
• ID: 7381555
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011988
• Strand: +
• Start bp: 464389
• End bp: 464820
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643649062
• Product: osmotically inducible protein OsmC
• Protein accession: YP_002547299
• Protein GI: 222106508
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1764] Predicted redox protein, regulator of disulfide bond formation
• TIGRFAM ID: [TIGR03562] peroxiredoxin, OsmC subfamily

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATCG AAAAATACGG TTCGGCCCAG TGGTCCGGTG GTTTGAAAGA CGGAAAAGGC 
AAGGTTTCGA CGCAGAGCGG CGCGTTGAAT GCCTATCCTT ACGGGTTCAA CACCCGCTTT 
GAAGGCGTCA CCGGCAGCAA CCCGGAAGAG CTGATCGGTG CGGCCCATGC GGCCTGCTTT 
ACCATGGCGT TGTCGATGAT GCTGGGCGAG GCTGGACTCA CCGCCGAAAG CCTGGAAACC 
AAGGCCAATG TGACCCTGGA AAAGCTGGAG GCTGGTTTTG CCATCACTGC CATCGAGCTT 
GTCTTGAAGG GTAAGGTGCC TGGTGCCGAT GAAGCCCGGT TTACGGAAAT TGCCAATCAG 
GCTAAGGCGG GATGCCCGGT TTCCAAGGCC CTGGCCGCCG TGCCGATTAG CCTCAGCGTT 
ACCCTGGGAT AA 

 

Protein sequence

MKIEKYGSAQ WSGGLKDGKG KVSTQSGALN AYPYGFNTRF EGVTGSNPEE LIGAAHAACF 
TMALSMMLGE AGLTAESLET KANVTLEKLE AGFAITAIEL VLKGKVPGAD EARFTEIANQ 
AKAGCPVSKA LAAVPISLSV TLG