Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5462 |
Symbol | treY |
ID | 7381554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 461742 |
End bp | 464273 |
Gene Length | 2532 bp |
Protein Length | 843 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643649061 |
Product | malto-oligosyltrehalose synthase |
Protein accession | YP_002547298 |
Protein GI | 222106507 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3280] Maltooligosyl trehalose synthase |
TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATCC CAACAGCGAC CTACCGCCTG CAATTTCGAA ACGGCATAAC ATTCGATCAT GCTATCGATC TTATTCCCCA TTTGAAATCG ATGAGCATCA GCCATCTCTA TGCATCCCCG ATCTTCACGG CCACCACTGG CTCCACCCAC GGCTATGATG TGGTGGATGC CAACGAAATC GACCCGGTTA TTGGCGGGAA AGCCGGTTTC GATCGGATGT GCGCGGCGCT TGCAAAGGCG GATATTGGTC TGATCCTCGA TATCGTTCCC AACCATATGG CGGCTTCGGT TGAAAATGCC TGGTGGTACG ACGTGCTGCG CAATGGCAGC CGCAGCGCCT ATGCCGGACA TTTCGATATT GACTGGAGCC GGAAGCTGAC CTTGCCGGTG CTTGGCAAGA CCCTTGAGGA TGCCCTTGGC GATGGTGAGC TGACGATCAT ACGGGATGAT AACGCTGACA GGTTCAGCCT TGCCTATTTC GAGACGCATA TTCCCTTGAG CGATGAAAGC ATCGAGCAGG CACTTGTCTC TGAAAAGACC GACCGGGCGA CCTTGGTCGA GGTGCTCGCC TCGCCTGAAA AAGTCAGGGC GTTACTCGAT GCCCAGCATT GGCAGCTTCA ACACTGGAAA CAGGCTGCGG AAAGCCTGAG TTATCGCCGC TTTTTCGAAG TCACCGGCCT TGTGGGTGTC TGCGTGGAAA AACCGCAGGT GTTTGAAGAA AGCCACCAGC TGATCCTTGA TCTGGTCCGG TCAGGGCAGG TTCAGGGATT GCGGATCGAT CATGTCGATG GGCTGGCCGA TCCGGCTGGT TATCTCGACC GCCTGCGCGA GGCGGCGGGG CCGCAGACCT ATATCACTGT CGAGAAAATT CTGGGGGCAG GCGAGGTGAT TGCGTCGAGC TGGCCGGTGT CCGGCACGAC GGGCTATGAG TTCATCACCG CCCTGTCGCA GCTCTACATC GATGGCGACG GGCTTGAACG CCTTCAGCAG GCCTATAACG ACACCGACGC AGGCGCTGCG GACTATGTCA AAGGCCTGCG GGATGCCAAG ACCCGGATGG TTCAACGCAA TTTCAAGGGT GAAGTCACCC GGCTGGTGGT GCTAGCGCAA TCGATTGGCA CCGGCCACGG CGAGGACGAG TTGCGCAAGG CGATACAGGA ATTGCTGATC GCTTTCCCAG TCTACCGGAC CTATGGCTAT CACGGTGGCC TTGATGCGCA GGACAAAATC GTCCTGGAAC ACGTCGTTGC GCAGGCTCGG CTCTGGGGCG TGGACGAGGG AGCGCTTGGT GTTATCGAAC GCCTGTTGCT CGGCGGGTTC GAGGCGGAGG CGGCAGATGA GTTCCGCACC CGTTTCCAGC AGTTGAGCGG TCCTGTCATG GCTAAGGCGT TGGAAGATAC GCTGTTCTAC CGCTACAACC GCCTGATTGC CGCAAACGAG GTTGGTGGTG AACCAGCCCA TCCGCCGGGC GGTGTGAGCG CCTTCCACGC CGCAATGGCT GAGCGCATGC AGACCCAGCC GCATGGTCTC ACGGCAAGCT CAACCCATGA TACCAAGCGC GGGGAGGATG CGCGCGCCCG TCTCTACACC CTGTCGGAAG GGGCGGATGC CTGGATCGAC GGTGTGAGCC GCTGGCGCCA GATGCATCGC GGCAATCTCA CCTCTTTACT AGACGGTCCC GCGCCCGATC CGAATGTGGA GTGGATGCTG TACCAGGCTT TGGCGGGGAT CTGGCTCGCG CCGACCGAAG CTACCGATCC TGCCACGCTG ACCGACCGCT TTCTGGCCTA TACTGAAAAA GCGCTTCGGG AGGCCAAGGT GCGAACGGAC TGGGCCGAGC CAAACGAGGC TTTCGAACAG GCGGTGCGCT CCTATGCCGA ACAGTTGGTG TCACCGGAAA ACCGAAGCTT CCTGACGGAT TTCAGCGATA CGCTTCAGCC CTTTATGGCG GCGGGCGAGG TCAACAGCCT CTCCCAGACG CTGATCAAGC TCACGGCGCC GGGCGTGCCG GATATTTATC AGGGAACCGA GGGCAAAGAC GACAGTCTGG TCGATCCGGA CAATCGTCGC ATCATCGATT ATCAGGCGCT GGCAGCCGAG GTGAGTGCGC CCGCAAATGA GGGCCCGGTC TCTTTCATTC AGCGCAAGCA AAGGCTGATC CGGGAGGTGC TCGCCCTTCG TAGCCGCCAT GCGAGCCTGT TCAATAACGG TGATTACGTG CCGGTGGAGG TCACTGGTCA TGCCCGGGAT CACGTCATCG CTTTCGCTCG GGTACAAGGC AATGATATCG CGTTGACCAT CGCGCCAAGA TTGGTGTTTG GCCGGATCGA TCCTGAGACG GCAAGGGTTG CTGCGGCGTT CTGGGCGGAT ACCAGGATTG TTTGGCCTGA GAGCGTGCAG GGACCGTTGC ACACTATTCT GTCAGGCCGG TCGTTCAATC GTGAACAGAT GCTGGTGTCA GATCTGCTCG ACGGTAACGA TATCGCCCTG CTGGTGACGC CTTCACTCAC TGCAACCGAC ATTCAGCGAT AA
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Protein sequence | MTIPTATYRL QFRNGITFDH AIDLIPHLKS MSISHLYASP IFTATTGSTH GYDVVDANEI DPVIGGKAGF DRMCAALAKA DIGLILDIVP NHMAASVENA WWYDVLRNGS RSAYAGHFDI DWSRKLTLPV LGKTLEDALG DGELTIIRDD NADRFSLAYF ETHIPLSDES IEQALVSEKT DRATLVEVLA SPEKVRALLD AQHWQLQHWK QAAESLSYRR FFEVTGLVGV CVEKPQVFEE SHQLILDLVR SGQVQGLRID HVDGLADPAG YLDRLREAAG PQTYITVEKI LGAGEVIASS WPVSGTTGYE FITALSQLYI DGDGLERLQQ AYNDTDAGAA DYVKGLRDAK TRMVQRNFKG EVTRLVVLAQ SIGTGHGEDE LRKAIQELLI AFPVYRTYGY HGGLDAQDKI VLEHVVAQAR LWGVDEGALG VIERLLLGGF EAEAADEFRT RFQQLSGPVM AKALEDTLFY RYNRLIAANE VGGEPAHPPG GVSAFHAAMA ERMQTQPHGL TASSTHDTKR GEDARARLYT LSEGADAWID GVSRWRQMHR GNLTSLLDGP APDPNVEWML YQALAGIWLA PTEATDPATL TDRFLAYTEK ALREAKVRTD WAEPNEAFEQ AVRSYAEQLV SPENRSFLTD FSDTLQPFMA AGEVNSLSQT LIKLTAPGVP DIYQGTEGKD DSLVDPDNRR IIDYQALAAE VSAPANEGPV SFIQRKQRLI REVLALRSRH ASLFNNGDYV PVEVTGHARD HVIAFARVQG NDIALTIAPR LVFGRIDPET ARVAAAFWAD TRIVWPESVQ GPLHTILSGR SFNREQMLVS DLLDGNDIAL LVTPSLTATD IQR
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