| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5457 |
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| Symbol | |
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| ID | 7381549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 455358 |
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| End bp | 456197 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649056 |
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| Product | ABC transporter substrate binding protein (amino acid) |
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| Protein accession | YP_002547293 |
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| Protein GI | 222106502 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCCA AGACAATGAC AATCAAGCGC CGCACAGCGC TCGCCCTGAT CGCGGCAGCG
GCGGCCATGC CGCTCGTCGC CCCCGCCACG GCCTTCGCCG GGACGCTGGA ACAGGCCAAG
GCCAAAGGCA AAGTGGTGAT CGGCATTCAG GGCGACAATT CGCCTTGGGG CTTTGTCAAT
TCCAGCGGCG TGCAGGACGG TCTGGATGCC GATATCGGCA AGGCCTATGC AGACTATCTC
GGCGTCAAGG CCGAGTTTGT GCCGCTGGCC GTGGCAAACC GCATTCCAGC CCTGATGACC
GGCAAGGTCG ATATCCTGTT TGCCACCATG GGCATGACCG CCGACCGCGC CAAGACCATC
CAGTTCTCCA AGCCCTATGC CGGCAACGTC TTGTCGGTCT ACGGACCGAA GGACAAGAAG
ATCGGCAGCT ATGACGATCT GACCGGCGTT TCCGTCGGCG TGCCGAAATC CAGCGCCATG
GATACCGCCA TCACCGCTGG CGCAGGCAGC AAGGCCAGCA TCCTGCGTTT CGATGATGAC
GCAGCAAACA TCCAGGCTCT GATTTCAGGT CAGGTCGAAG CCGTCGGTGG CAACCAGTTC
TATGGCGATC GGCTGAACGC TGCCGCTGCG GGCAAGTATG AAACGAAGTT CGACCTCGTC
ACGCTCTATA ACGGCGCCGG AATGCGTCCG GGCGAGAAGG ACTGGAACGA AAGCATCAAC
AGTTTCATCG ACAAGATCAA GGCCGATGGC CAACTGGCAA AGATCTACGC CAAGTGGATG
AAGCGCGATG TTCCGGCATT CCCGGATTCG CTTCCGGACA TCCCGTTCAC CGCGAAGTAA
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| Protein sequence | MKSKTMTIKR RTALALIAAA AAMPLVAPAT AFAGTLEQAK AKGKVVIGIQ GDNSPWGFVN
SSGVQDGLDA DIGKAYADYL GVKAEFVPLA VANRIPALMT GKVDILFATM GMTADRAKTI
QFSKPYAGNV LSVYGPKDKK IGSYDDLTGV SVGVPKSSAM DTAITAGAGS KASILRFDDD
AANIQALISG QVEAVGGNQF YGDRLNAAAA GKYETKFDLV TLYNGAGMRP GEKDWNESIN
SFIDKIKADG QLAKIYAKWM KRDVPAFPDS LPDIPFTAK
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