Gene Avi_5453 details

Gene Information

• Locus tag: Avi_5453
• Symbol: aroQ
• ID: 7381546
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011988
• Strand: -
• Start bp: 453205
• End bp: 453648
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643649053
• Product: 3-dehydroquinate dehydratase
• Protein accession: YP_002547290
• Protein GI: 222106499
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0757] 3-dehydroquinate dehydratase II
• TIGRFAM ID: [TIGR01088] 3-dehydroquinate dehydratase, type II

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.747889
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCTGT TTTTCATCCT GAACGGTCCA AACCTCAACC TTCTCGGCCA ACGTCAGCCT 
GAGATTTACG GTCGCGAAAC CCTTGTCGAT GTCGAGGACA ATTGCCGCGC GATTGCCGAG 
GCGGCAGGAC ATTCGATCTT TTTCGCGCAG AGCAACCGGG AATACGAGAT CATCGACTGG 
GTCCACGAGG CACGCGGCAA GGCGGCTGGA ATCGTCATCA ATCCCGGTGC CTTCACCCAT 
ACGTCGGTGG CGATCCTCGA TGCCCTCAAC ACCTTTGAGG CACCGGTCAT CGAAGTGCAT 
ATTTCCAACA TCCACAAGCG GGAGGTGTTC CGGCATCACT CCTACGTTTC AACACGGGCG 
GAGGGCGTCA TCGCGGGACT GGGCATCGAG GGCTATGAAA TGGCATTGCG CCATCTTATC 
AGCCGCGTTG CTCGATCGGG CTGA 

 

Protein sequence

MSLFFILNGP NLNLLGQRQP EIYGRETLVD VEDNCRAIAE AAGHSIFFAQ SNREYEIIDW 
VHEARGKAAG IVINPGAFTH TSVAILDALN TFEAPVIEVH ISNIHKREVF RHHSYVSTRA 
EGVIAGLGIE GYEMALRHLI SRVARSG