| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5447 |
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| Symbol | |
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| ID | 7381542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 448951 |
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| End bp | 449694 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649049 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002547286 |
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| Protein GI | 222106495 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.726701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCTT TGCAGCTTGA AAACCTTACC TTGCAATTCG GTGGACTGGT GGTCACCAAT
AATGTGTCGC TCGTGCTTGA GAAGGGTGCA CGCCACGCTT TGATCGGGCC AAACGGTGCT
GGCAAGACGA CGCTGATCAA TCTCATTACT GGCAGGCTGA CCCCACGCAA GGGGGCGATA
TTTCTCGATG GTATAGACCT CAAGGGCATG GCGCAGCACA AGCGCGTTGG GCTGGGATTG
GTGCGCAATT TCCAGGTCAC CAATCTGTTT ACGTCATTCA CAGCCCTTGA AAATATCGCG
CTTGCAATTG GCGAACGTGA AGGCTTTGGG TTTTCAATGG CAGGGCATCA TGGCTTCCCG
GCAAAAGTGG TCGCGGAAGC AGAAGAAATC GCCAGCCGTA TGCGCCTTGC CAATGTCCCG
CATGTTCCGG TGCGCGATCT GGCCTATGGC CAGCAGCGCC TCGTGGAACT GGCGGTCGCC
ATGGCCCTGC GCCCGAAAGT GCTGTTGCTG GATGAGCCTG CCGCTGGACT GCCTGCGGCG
GATCATGAGG TGATCCTCAC TATTCTCGAT GAATTGCCAG CCGATGTTGC CGTTTTGCTG
ATCGAGCACG ATATGCCGCT AGTCTTCCGC TTTGCGCGGG AGATCACGGT CTTGGCCGAG
GGAACCATCA TCGCGCGTGG CACGCCAGAG GAAATTCGCC ATGACGCCAA TGTCCGTGCC
GCTTATCTGG GGAACCGTTC ATGA
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| Protein sequence | MSALQLENLT LQFGGLVVTN NVSLVLEKGA RHALIGPNGA GKTTLINLIT GRLTPRKGAI
FLDGIDLKGM AQHKRVGLGL VRNFQVTNLF TSFTALENIA LAIGEREGFG FSMAGHHGFP
AKVVAEAEEI ASRMRLANVP HVPVRDLAYG QQRLVELAVA MALRPKVLLL DEPAAGLPAA
DHEVILTILD ELPADVAVLL IEHDMPLVFR FAREITVLAE GTIIARGTPE EIRHDANVRA
AYLGNRS
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