| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5440 |
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| Symbol | |
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| ID | 7381536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 441497 |
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| End bp | 442336 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649043 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547280 |
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| Protein GI | 222106489 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTCA CAGCCGTTCA AGCAGGTGCG TACCTGCATC ACGTTGCATT CGAAAGCTCC
AATCCTGAGC GTCTGGCGCG GTTCTATGCC GATGCCATGG ACATGAAGCT CGAAAAGGTT
GGAGACGAGT GGATTTGTGA AGGGCCAAAG CGCCGCTTCA TCGCCGTTGC TGGAGCTGAC
AAGAAGCTGG CTTATTCCGG ACTTGCTTGC CGCAATGCCG AAGGGCTTGC GCTTCTGCGG
GCCCGGGTCG ATGCTGAAGG CATTGCGGTG CTGGCTAGCC CTTCGCCCTA TTTTGAAGAT
GGTGCATTCG CGATTCGCGA TCCCGACGGA CGTATGGTGT GCTTCGGTGT AGCCAAGCCA
GACAAGCCGG GCGCCAAGGG TATCCAGGGT CCAACGCAGC ATCTAACCTA TGCATCCGAG
GATGTGGCCG CGTTTGTCGA CTTTTACGTC GGCAAGCTGG GTTTCCAGCT GACAGACCGC
GTGCTGCATG AAGATGGCCG GCTTGCCACC GCCTTCACGA CCTCCAATCA CGAGCATCAC
ACCATCGCCT GCTTCTATAC GCCGGGCCGC GTTGGCGTCG ATCACCATTC CTACGAGGCT
GGGGAATGGA ACTACATCCG TGATTGGTGC GATCATCTGG CAACTCATGA TATCCAGCTC
AGCTGGGGTC CCGGTCGCCA TGGTCCTGGC AACAATCTCT TCATTTTCAT CACTGATCCG
GATGGCAATT GGATCGAGAT CTCGGCTGAA CTGGAAGTTA TCTACGATCG CGACACGATG
GATTGGCCGC AGCATCCGCG CACGCTCAAT AAATGGGGCG AGGCGATTCT TCGCTCCTGA
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| Protein sequence | MAFTAVQAGA YLHHVAFESS NPERLARFYA DAMDMKLEKV GDEWICEGPK RRFIAVAGAD
KKLAYSGLAC RNAEGLALLR ARVDAEGIAV LASPSPYFED GAFAIRDPDG RMVCFGVAKP
DKPGAKGIQG PTQHLTYASE DVAAFVDFYV GKLGFQLTDR VLHEDGRLAT AFTTSNHEHH
TIACFYTPGR VGVDHHSYEA GEWNYIRDWC DHLATHDIQL SWGPGRHGPG NNLFIFITDP
DGNWIEISAE LEVIYDRDTM DWPQHPRTLN KWGEAILRS
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