| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5426 |
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| Symbol | |
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| ID | 7381524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 427376 |
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| End bp | 427876 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649032 |
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| Product | Sulfopyruvate decarboxylase alpha subunit |
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| Protein accession | YP_002547269 |
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| Protein GI | 222106478 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4032] Predicted thiamine-pyrophosphate-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.510456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAT CATCCGTCGA TGCCGTTATC CGAGGCCTCA AGAAAGCCGG GGTCAGTGTC
GTTTGCTACC TGCCCGACTC GCTGTTTAAG GAATTGTATC CGGCACTGGA TGCCGATCCT
GAGATCCGCA CCATCCGTGT CACCAATGAG GGCGAGGGGG CGGCAATCTG CGGGGGCGTG
TTTCTCTCTG GCAAGCGGGC GGCGCTGGTC ATGGAAAATT CCGGTCTGCG GGCTTCCGTT
GAACCGCTGG CGCGCATGGG GCTTGGGGCT GGTATTCCGG TCGTCATGCT GATGAGCTAT
CGCGGCGAAC TGGGAGAAAA CAACTGGTGG GCCATTCCCC ACGGCATCAC CATGGAGCCG
GTGCTGAACG CGCTGCGCAT TCCCTACCGG GTGGTGCGCG AGGAAGACGA AATCGAGCAA
TCGATCATCG ATGCCTATAA CTGGTCCTAC AATGCCTACT ACCACTCGGC CATCGCCCTT
GGCGGGAGCA TCGTCCGATG A
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| Protein sequence | MKPSSVDAVI RGLKKAGVSV VCYLPDSLFK ELYPALDADP EIRTIRVTNE GEGAAICGGV
FLSGKRAALV MENSGLRASV EPLARMGLGA GIPVVMLMSY RGELGENNWW AIPHGITMEP
VLNALRIPYR VVREEDEIEQ SIIDAYNWSY NAYYHSAIAL GGSIVR
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