| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5425 |
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| Symbol | |
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| ID | 7381523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 426332 |
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| End bp | 427282 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643649031 |
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| Product | Transcriptional regulator |
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| Protein accession | YP_002547268 |
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| Protein GI | 222106477 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCCT ACCGGCTGGG CCTGGTTGCA ACGCGCATCC ATTATTTCCA GCTGGTGGCG
CGGCTGGGCT CGATCCGCCA GGCCGCCCTT GCCCTCAATG TCGCACCCTC TTCCGTCAGC
CGCATCCTGC GCCGATTGGA AGAGGAAATC GGCACGCCGC TGTTTGACCG GGTGCGCCAG
CGCCTGAAAC TGACCAGCGC CGGTGAACTG CTGCTGTATC ACGCCAAGGC ATCGCTGTCG
GAACTCAGCC GGGCCTGTGC CGAAATCAAC GATCTGCATG GCCTGCATCG AGGCACCGTC
TCGGTGGCTG TGGTGGAAAG TGTGGCGCGG GGCCTGTTAC CAGCGGCGCT GGAGGCATTC
TGGAGCCGCC ATCCGGCGAT TACCGTCGAT GTCAAGGTCA TGGCCTCGCA GCAGGCGGCC
AATGCCGTGG CCGAAGGCGA ATGCGATCTT GCGGTTCTTT TCGACGTGCG CGTGCCGCGT
ACCGTGCGCC GCATTGCCAG CGTGTCGCTG CCAATCGGCG TTTTGGCCCT GCCGGACAGT
GACATGGCCA AGCGCACGGA AATCAAGCTG TTTGATCTCG CCAATCTGCG GGTGATCCTC
TCGGATGCCA GCCTGACGCT GGGTGCTTCG GTGGAGGAAG CGTTGAACCG GTCGCTGGTG
GATCTCTCGC ACCGCTCACG GACCAATTCC ATCGGCCTGA TGGTGGAATT GGCGAGGCGC
AATCTCGGCC TTGTCTTGCA GACCCGGGTC GGCGTGGAGC AGGAACTGGC GGAAGGGTCG
CTGGTGTTTG TGCCGCTTTC CGACAGCCGC TTGCCGAACC GCAAGCTGCT GTTGCTGTCG
CGCTCCGCCA AGGAGATGTC GGATGCGGCC TCGGCGCTGG GGCGGCTGCT GGAGCAATCG
GTCGAACAGC TAACCCAGGC GGCAGCACAC GCGCCGCGAG ATCTATCGTA A
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| Protein sequence | MDAYRLGLVA TRIHYFQLVA RLGSIRQAAL ALNVAPSSVS RILRRLEEEI GTPLFDRVRQ
RLKLTSAGEL LLYHAKASLS ELSRACAEIN DLHGLHRGTV SVAVVESVAR GLLPAALEAF
WSRHPAITVD VKVMASQQAA NAVAEGECDL AVLFDVRVPR TVRRIASVSL PIGVLALPDS
DMAKRTEIKL FDLANLRVIL SDASLTLGAS VEEALNRSLV DLSHRSRTNS IGLMVELARR
NLGLVLQTRV GVEQELAEGS LVFVPLSDSR LPNRKLLLLS RSAKEMSDAA SALGRLLEQS
VEQLTQAAAH APRDLS
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