| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5422 |
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| Symbol | |
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| ID | 7381520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 423154 |
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| End bp | 423846 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649028 |
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| Product | oxidoreductase protein |
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| Protein accession | YP_002547265 |
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| Protein GI | 222106474 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.20856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATTG AAACAGCATG GGTGCCGGTG GCGCTGTCTT CGTCTATCGA GCCGGGAACC
TCGGCTGGTG CTGTCGTTGA TGGTGCGGAG ATCGTCGTCT GGCGCGATGC CAAGGGGGCA
GCGCATGTCT GGGAAGACCG CTGTCCGCAT CGCGGCATGC GGATGAGCTT TGGCTTCGTG
CGGGGTGACC ATATTGCCTG TCTCTACCAC GGATGGTCCT ATGATACGGC GGGACAATGC
ACCCATATCC CGGCGCATCC CGATCTGGAT GTGCCGAAGA CCATCCGGGT GACGACCTAT
GCCGCCGAGG AGCGCGATGG CGTGATCTGG GCAGCACTTG CCGATCATGC CGACGTGGCC
AGCATCCCGG ATCTTGGTGT GGGCTTAAAC GTGCGCAGCC TTTATGCGGA TTGTACCATT
CAACAGGCCA TGAATGTGCT GAAGGAAGCG CAACTCCCGA CCAAAGAGGG GATTTTACCC
GCACATTTTG AGGTTCTCAC GGCCAATGCC TGGCGGCTTG AGGCTGGTGA TCTACGTGTT
GCGATTGCAG TTCAAGTGAT CTCCGCTGGA AGGCTTGCCC TCCATCTTGT GACCGATGCA
GGATCGACGG CATTGAGACC GGCGCTTGCC CGCTGGGCAG AGGCACTGCG CCTGACACTT
GAGGCGCCCT CCCCATTGGC ACAGGTGGCC TGA
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| Protein sequence | MSIETAWVPV ALSSSIEPGT SAGAVVDGAE IVVWRDAKGA AHVWEDRCPH RGMRMSFGFV
RGDHIACLYH GWSYDTAGQC THIPAHPDLD VPKTIRVTTY AAEERDGVIW AALADHADVA
SIPDLGVGLN VRSLYADCTI QQAMNVLKEA QLPTKEGILP AHFEVLTANA WRLEAGDLRV
AIAVQVISAG RLALHLVTDA GSTALRPALA RWAEALRLTL EAPSPLAQVA
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