| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5419 |
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| Symbol | |
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| ID | 7381518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 419613 |
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| End bp | 421208 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643649026 |
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| Product | ABC transporter nucleotide binding/ATPase protein (sugar/ribonucleotide) |
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| Protein accession | YP_002547263 |
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| Protein GI | 222106472 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.210593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAC ATCCTGCGAA ATTTGCAGTG CCGACGGGGG CAGCCCCTCT CGTCCAGTTA
AAAGGCATTG CCAAATATTT CCCCGGCGTC ATCGCCAATC GCGATGTCGA TCTTGAAGTC
ATGCCCGGTG AAATCCACGC GCTGCTGGGG GAAAATGGCG CTGGAAAATC GACACTGATG
AATATCCTGA CCGGCATTTA CCAGCCGGAT GCGGGCGAGA TCATCATCGA CGGCTATGCA
AGGCAATTTA CCGGACCGCA ACAGGCGATT GCCGCTGGCA TCGGCATGAT CCATCAGCAT
TTCAAGCTGG TGAATGCCTT TACCGTGGCG GAAAACATTC ATCTCGGCTG GAGTGAGACA
CCCCGCCGTG CCTCGGCCCC GGTTCTGGAG GAACGCACCG CAGAGCTCGC GGCCAGGTTC
AACCTTCAGG TCAAGCCTTC GGCGCGGATA ACAGGGCTTT CGACCGGCGA ACAGCAGAGG
GTTGAAATCC TGCGGGTACT GGCCCGCAAG GCCCGCGTGC TGATCCTCGA TGAGCCGACT
GCCGTCTTGA CGCCGCTTGA GGCACGCGAG CTGTTCAAGG CCTTGCGCGA TTTCGTCTCC
ACCGGCAATG CGGTGATCTT CATCTCCCAT AAGCTCGATG AAGTACTGGA AATTTCCGAC
CGGGTGACGA TCCTGCGCGG CGGGCAAAAG GTCGGCACCG AGCTTTCCGC CGATTGCAGC
CCGGCCAAGC TGGCGCGGCT GATGGTCGGG CGCGATATCG TGCTGGCCGA TATGCGGGGC
CGCCCGCAAG GTGCCGCCGC GCTGTCGTCT GCTCCTGTCA TGCGGGTCAG CACAGTGACG
GCGCTGGACG ATAGCGGACG CCAAGCCTTG CACGATATCT CCCTTGATCT GCGTGCAGGC
GAAATCCTTG GGATTGCCGG GGTGGCAGGC AATGGTCAGC GTGAACTGTC GCAAGTGGTG
ACCGGCACGC GACCCATCGC CTCCGGCACC ATCGAAATCG ACGGCGAAGC GGTTGGCGAC
GCGAATGCCG CCGATTTCGT GCGGCGCGGC ATCGGCCATA TCCCGGAAGA CCGGCTACAA
AGCGGCTTGG CACCGGGGCT GTCGATCACC ATCAATGCCG TGATGCGCGA ATATGGCAAA
CCGCCGGTCA CCGTTGGCGG CCTGTTTCGC CCCTCCGCCG CCAAGGCGCT GGCCCGCAGC
ATCGCCAGCG TGGCAGAGGT CGCCATCCCG GATTTTGCCA TGCCGATCCG CAATCTATCC
GGTGGCAACC AGCAAAGACT GGTGGCGCGG CGCGAAATGC GGATCGCCAC GAAAATCCTG
GTCGCCGCCT ATCCGAGCCG GGGGCTGGAT GTCGGGGCGA TCAATACCAT GCTGCGCTAT
ATCGTTGACC TGCGCAATGC AGGCGCCGGT ATCCTGCTGA TCTCGGAGGA GCTTGAAGAA
TTGCTGAACC TCTCCGACCG CATCGCCGTG CTCTATGAGG GGCGGATCAT GGGCATCGTC
GAGAATGACA GCACCGATAT CGAGCAGATC GGCCTGATGA TGGGCGGGCG ACAGCTTCAG
CCGGGCCAGT TGGCAGGAGG CACGCAGCAT GGCTAG
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| Protein sequence | MNEHPAKFAV PTGAAPLVQL KGIAKYFPGV IANRDVDLEV MPGEIHALLG ENGAGKSTLM
NILTGIYQPD AGEIIIDGYA RQFTGPQQAI AAGIGMIHQH FKLVNAFTVA ENIHLGWSET
PRRASAPVLE ERTAELAARF NLQVKPSARI TGLSTGEQQR VEILRVLARK ARVLILDEPT
AVLTPLEARE LFKALRDFVS TGNAVIFISH KLDEVLEISD RVTILRGGQK VGTELSADCS
PAKLARLMVG RDIVLADMRG RPQGAAALSS APVMRVSTVT ALDDSGRQAL HDISLDLRAG
EILGIAGVAG NGQRELSQVV TGTRPIASGT IEIDGEAVGD ANAADFVRRG IGHIPEDRLQ
SGLAPGLSIT INAVMREYGK PPVTVGGLFR PSAAKALARS IASVAEVAIP DFAMPIRNLS
GGNQQRLVAR REMRIATKIL VAAYPSRGLD VGAINTMLRY IVDLRNAGAG ILLISEELEE
LLNLSDRIAV LYEGRIMGIV ENDSTDIEQI GLMMGGRQLQ PGQLAGGTQH G
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