| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5414 |
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| Symbol | |
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| ID | 7381514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 415368 |
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| End bp | 416759 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649022 |
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| Product | chlorohydrolase family protein |
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| Protein accession | YP_002547259 |
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| Protein GI | 222106468 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | [TIGR02967] guanine deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCATGACC AATACCGCGT ACCAGCCATG AGCGATTTCA GAAACCGGGT ACTGATCGCC
AGCGGTTTTC ATGCCCCGGT GGCTGGCGAA ATCGATATGC TGACTGATTG CCTGATCGCT
ATTGATGCGG AGGGCATGAT CCTCTCCGTG CAGCGTCCCG GCGATGACGG ATATGCATTG
ACGAAAGCCG AAGCCGACCG CCAGGGGCGG CTATCACGCT TGCCTGCGGG TTGCCTGCTC
CTGCCGGGCC TGGTGGATTG CCATGTGCAT GCGCCACAAT ATCCTCAGCT TGGCACAGCG
CTGGATGTGC CGCTTGAAAC CTGGCTGCAT GCCCATACCT TCCCGCTGGA AGCCCGCTAT
GCGGACTTAG CCTATGCAAA GCGAGTCTAT GGCCTGCTGG TTGATGATCT GCTGGCCAAT
GGAACGACGA CGGCGCTGTA TTTCGCCACC ATCCATCAGG ATGCGACCCG CATTCTCGTC
GATACCTGCC TTGAAAAAGG CCAGCGCGCC CTGATCGGCA AAGTCGCCAT GGACAATGCC
GAACAATGCC CGGACTATTA CCGCGACGCC TCACCGGATG CGGCTTTGCA GGGAACACAA
GCGCTGATCG ACTATATCAG CACTCATCCC GACAACACGG CCTCCCGCGT CTGGCCGGTG
GTGACTCCAC GGTTCATTCC GGCCTGCACG GATGCGACGC TGGAAGGCTT GGGGGCTATG
GCCCAAGACT GTGGCTGCCA TGTGCAGACC CACTGTTCGG AAAGCGATTG GGAACACGCC
TATGTGCTAT CGCGCCACGG CATGACGGAT GCGATGAGCC TTGATCGCTT CGGCCTTCTC
ACCCGCCGCA GCATGCTTGC CCATGCCAAT CTGCTGACTG CTGATGATAT GGACCTGATC
AAGCTGCGAC AGACAGCGGT GGCGCATTGC CCGCTCTCCA ACGGCTATTT CGCTGGTGCG
GTCTTTCCCC TGCGGGCTGC CCTGGAAAAG GGCCTGCATG TCGGGCTGGG CAGCGATATT
TCCGGCGGAC CGAGCGCCTC GCTTCTGGAC AATATGCGCG CCGCCATTCT CGTCTCCCGC
ATGCTGGAAA CCGGGGTCGA TCCGGGCCTC CCGCCGGAAA AGCGCGCAAG CGGCACGAAG
GCCCGCATCG ACTTTCGCCA CGCCTTCCAC GTCGCCACCG CTGGCGGCGG CAAGGCATTG
GATCTGCCCA TCGGCCAATT TGCCCCGGGC TATCGCTTCG ATGCCATCGT CGTTGATCCG
CAGGCCGCCC AAGGCACGCT GCGGTTCTGC GAGAGTGATG AAATGACTGA GACCCTGCTC
CAGAAAATCG TCTTTACTGC ATCGCGTGCC AATATCTCTG CCGTGTTTAT CGACGGATGC
AAGGTGGCCT GA
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| Protein sequence | MHDQYRVPAM SDFRNRVLIA SGFHAPVAGE IDMLTDCLIA IDAEGMILSV QRPGDDGYAL
TKAEADRQGR LSRLPAGCLL LPGLVDCHVH APQYPQLGTA LDVPLETWLH AHTFPLEARY
ADLAYAKRVY GLLVDDLLAN GTTTALYFAT IHQDATRILV DTCLEKGQRA LIGKVAMDNA
EQCPDYYRDA SPDAALQGTQ ALIDYISTHP DNTASRVWPV VTPRFIPACT DATLEGLGAM
AQDCGCHVQT HCSESDWEHA YVLSRHGMTD AMSLDRFGLL TRRSMLAHAN LLTADDMDLI
KLRQTAVAHC PLSNGYFAGA VFPLRAALEK GLHVGLGSDI SGGPSASLLD NMRAAILVSR
MLETGVDPGL PPEKRASGTK ARIDFRHAFH VATAGGGKAL DLPIGQFAPG YRFDAIVVDP
QAAQGTLRFC ESDEMTETLL QKIVFTASRA NISAVFIDGC KVA
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