| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5412 |
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| Symbol | |
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| ID | 7381512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 413162 |
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| End bp | 414352 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649020 |
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| Product | transcriptional regulator ROK family |
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| Protein accession | YP_002547257 |
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| Protein GI | 222106466 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.125738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTCT GGACGAGCAC ACCGCCGATG TTACGCCAGA TCTCCGTTCG CGCCGCTATG
GACATCCTTC TGCACCAAGG CCCGACCTCG CGGGCGGATC TGGCAAAAAA GACTGGCCTA
TCGAAACAGA CCATGTCCGA GGTCATACGC ACGCTTGAGA CGGCAGGCTG GGTTCGAGTC
AAGGGAATCG TGTCCGGCAA GGTCGGGCGC AGTGCCGTGA CCTATGAAGT CGCCCCGGAT
GCGGGTTTTG TCATCGGTAT GGATATCGGT GCAACGACCA TTCGGGTGGC GATTGCCGAT
ATTGCCGGAA CGATTGTCCA TGAAGTCGAA AAGTCGGCCG GAGAGCATGG TGGGGAGGCC
CTTCTGGCGC ATGTCAGCGG CGTTGTCGAA GCGTCGCTTA AAAAGGCGAG GGTTTCCCGC
AGCAAGGTTC TGTTGGCCGC TGTGGCCATG CCTGGCGTCA TCGATCCTGA AACCGGTCGG
CTTTCGCTTG CGCCGAACCT GTCAGAAATT GGCAGTCTCG ATGTGATCAA GGCCTTGCAG
GGCATTTTCC GCTGCGATGT CATCATCGAA AACGATGTCA ATGCGGCGGT GATTGGCGAA
AGCTGGAAAG GCAGCGGCAT CGGTCTCGAT TCGGTTGCGT TCGTGTCGCT GGGAACCGGT
ATTGGCCTTG GCGTCCTTTT CAACGGCAAG TTGATGCGCG GGGCTAAAGG AGCGGCAGGC
GAAATCGGCT ATCTGCCGTT CGGAGCCGAT CCCTACAACT CGGAAAGTCT GGAGCGCGGC
GCGCTCGAAT GCGCCATTGG CGCCCGTGGC ATTCTGGAGC GCTATGGCAA CCCTGGAGAC
GGCGGTATGA CGGTTCGCGA TATTCTTGAA GCGGCTGAAA AGGGCGACGC AAAGGCGCTG
GCAACCGTGC AGGAAACAGC GCGGCTGGCG GCTTTGCTGG TGGTTTCGGT TCACGCCATG
CTCGATCCGG GTAAGATCAT TCTCGGTGGC AATGTCGGTC GCAATCCGTT GATGGTGCGC
ATGGTCAAGG AGGCGCTGGC AACCTCGACT CGCAGCAGCA TTTCGCTTGA GGCGAGCACG
CTTGCGTCCC GCGCCACCTT GGTTGGCGCG GTGGCCATCG CGCTCAACCA GCTTCACAAT
GCGCTGTTTT CCCCCCAGGA TCTTCCAAGC GAAATGCGTC TGCCAGCCTG A
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| Protein sequence | MNLWTSTPPM LRQISVRAAM DILLHQGPTS RADLAKKTGL SKQTMSEVIR TLETAGWVRV
KGIVSGKVGR SAVTYEVAPD AGFVIGMDIG ATTIRVAIAD IAGTIVHEVE KSAGEHGGEA
LLAHVSGVVE ASLKKARVSR SKVLLAAVAM PGVIDPETGR LSLAPNLSEI GSLDVIKALQ
GIFRCDVIIE NDVNAAVIGE SWKGSGIGLD SVAFVSLGTG IGLGVLFNGK LMRGAKGAAG
EIGYLPFGAD PYNSESLERG ALECAIGARG ILERYGNPGD GGMTVRDILE AAEKGDAKAL
ATVQETARLA ALLVVSVHAM LDPGKIILGG NVGRNPLMVR MVKEALATST RSSISLEAST
LASRATLVGA VAIALNQLHN ALFSPQDLPS EMRLPA
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