| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5408 |
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| Symbol | |
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| ID | 7381508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 406328 |
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| End bp | 407311 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649016 |
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| Product | flavonol synthase/dioxygenase |
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| Protein accession | YP_002547253 |
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| Protein GI | 222106462 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3491] Isopenicillin N synthase and related dioxygenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.293243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAGCT ACAGCCTTGC CGAATTGAAC AAGGAAACCA CCATTGGCGG CATCGGCAAG
ACCGTCGAGC GCGACGTGCC TGTCATTGAT CTCGCCGATT TCGACAATCG CAAGGCAGAG
ATCGCCGATC AATTGTGGGA GGCCTCGGTT GGTATCGGGT TTTTCCAGGT CTATAATCAC
GGCATTCCGC AGCAGGATAT CGATGCGGCT TTTGAGACAG CCTGGTCCTT TTTCGAATTG
CCAGCGGACA TCAAGGCCCA GTATCCGATG CCAAAGGGAA CCAATGCCGG ATGGGAATTC
AAGGCGCAGG TGCGCCCTTC CACCGGCACG CCGGATAACA AGGAAAGCTA TCAGATTACC
CGCCCGATGA TGGGTGGACT GTGGCCGAGC GAAGAAGAAC TGCCTGATTT CAAGGAGAAG
ATGCTGCGCT TCGAGCGGCA GAATTGGGAG CTCGGCATGC GCATTCTCTC CTGCTTTGCC
CTCAAGATGG GCTTTGCCGA GGACTTCTTC ACCAAGGCGC ATGATCCGGC ATCCAGTGAG
TACCAATCGA CGCAGCGGCT GATCCATTAC ATGTCGATGG AACATGCCAA GCCGGAGGAT
TTCGAGTTCT GGCGGGCCGG TGCGCATTCC GATTTCGATT GCCTGACCAT CCTACACCAA
AAGGAAGGCG AGGGTGGCTT GCAGGTCTGC CCCGGCAAGG ATGCGGCCTC CGGCGAGTGG
ACGGATGTGC CGCCGAAAAA CGGCTATATC ACCTGCAATA TCGGTGACAT GCTGATGCGC
TGGTCCGATG ACCAGCTACA ATCGACGCTT CACCGTGTCC GCATGCCGCG TCCTGGCGAA
TATCTGGGCC GCCGCCTTTC GCTTCCCTTC TTCTGCCAGG CCAATCGCGA TGCGGTCATG
CAGGGTCCGC TTGGCAAATA TGAGGCGATC ACTGCCGGTG ATTACCTGAC GCAGCGCATC
AACGCCAACT TCGCCCGGAA ATGA
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| Protein sequence | MQSYSLAELN KETTIGGIGK TVERDVPVID LADFDNRKAE IADQLWEASV GIGFFQVYNH
GIPQQDIDAA FETAWSFFEL PADIKAQYPM PKGTNAGWEF KAQVRPSTGT PDNKESYQIT
RPMMGGLWPS EEELPDFKEK MLRFERQNWE LGMRILSCFA LKMGFAEDFF TKAHDPASSE
YQSTQRLIHY MSMEHAKPED FEFWRAGAHS DFDCLTILHQ KEGEGGLQVC PGKDAASGEW
TDVPPKNGYI TCNIGDMLMR WSDDQLQSTL HRVRMPRPGE YLGRRLSLPF FCQANRDAVM
QGPLGKYEAI TAGDYLTQRI NANFARK
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