Gene Avi_5403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5403 
Symbol 
ID7381505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp403631 
End bp404620 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content59% 
IMG OID643649013 
Producthypothetical protein 
Protein accessionYP_002547250 
Protein GI222106459 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.164568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCGTC GTAAGCTTGC GTCCACGCTG TTCACTCTTG GCCTTTTCTC CGGGACTGCC 
CTTGCCGCCG ACAAGGTTAC GTTCCAACTG GACTGGCTGC CCGGTGGCGA CAAAGCGCCG
ATTTATGTCT GTATCCATCA GGGCTTCTGT CGGGACGCGG GGCTGGATGT GACGATTGCC
TCGGGTCGAG GCTCGACCGA GGCGATTTCG AAACTGGCGG CAGGATCTTC CGATATTGGT
GTTTCGGATA TCGGCGCCTT GATGGCGGCC CGCGCCAATG AAGGCGTGAA GGTTATTGGT
GTCCTATCGG TGTTCAACAA GGGACCACAC GCCTTCTATG TCATCAAGGG TGGCTCAATC
GCCAGTGTTG CCGACGTCAA GGGCAAGACC ATCGCCACAT CGCCGTTTAC CTCGTCCAAT
GTCTATCTGC CGCTGGTGCT GAAGGACCAG TCCATCGATC CGGCGGCGAT CAAGCTGATC
AAGGCCGATC CCGGTGCGCT CGGTCCGATG CTGATGACCG GCAATGCCGA TGGCATCATT
GCCTGGATGA CGGATTTCAC CCGCTATTCC AACCAGGCCC GCCAGGCTGG CAAAGAAATC
GTCGCGCTGC CGTGGTCGGC TGCCGGGCTT GAGCTTTATT CGGCCTCGTT GATTGCCAGC
GAGGATTTCC TGGCCAAGCG CCCGGATGTC GCCAAACGTT TCATCGACGC CTACAAGAAG
TCGGTGCAAT TCACCCGCGC CAATCCTGAT GCCGCCGTCA CCTCCGTCAC CAGTGTGGTG
CCGGAACTGG GGTCGGAAGA CGTCAAGGGA TCGATCAATG ACACGCTGCC GCTGATTTTC
AATGAGGTCA CGGACAAGGA TGGCTTGGGC GTGTTCGAGC CCAAGCGCCT GACGGAAACC
TGGCGCCGGG TTGCCGCCGC CCAAGCCATC GATCCGGCCA AGCTTGACCC GGAAACGGTG
GTCAACCGCA GCTTCATTCC GACGGAGTGA
 
Protein sequence
MFRRKLASTL FTLGLFSGTA LAADKVTFQL DWLPGGDKAP IYVCIHQGFC RDAGLDVTIA 
SGRGSTEAIS KLAAGSSDIG VSDIGALMAA RANEGVKVIG VLSVFNKGPH AFYVIKGGSI
ASVADVKGKT IATSPFTSSN VYLPLVLKDQ SIDPAAIKLI KADPGALGPM LMTGNADGII
AWMTDFTRYS NQARQAGKEI VALPWSAAGL ELYSASLIAS EDFLAKRPDV AKRFIDAYKK
SVQFTRANPD AAVTSVTSVV PELGSEDVKG SINDTLPLIF NEVTDKDGLG VFEPKRLTET
WRRVAAAQAI DPAKLDPETV VNRSFIPTE