Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5403 |
Symbol | |
ID | 7381505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 403631 |
End bp | 404620 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643649013 |
Product | hypothetical protein |
Protein accession | YP_002547250 |
Protein GI | 222106459 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.164568 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCGTC GTAAGCTTGC GTCCACGCTG TTCACTCTTG GCCTTTTCTC CGGGACTGCC CTTGCCGCCG ACAAGGTTAC GTTCCAACTG GACTGGCTGC CCGGTGGCGA CAAAGCGCCG ATTTATGTCT GTATCCATCA GGGCTTCTGT CGGGACGCGG GGCTGGATGT GACGATTGCC TCGGGTCGAG GCTCGACCGA GGCGATTTCG AAACTGGCGG CAGGATCTTC CGATATTGGT GTTTCGGATA TCGGCGCCTT GATGGCGGCC CGCGCCAATG AAGGCGTGAA GGTTATTGGT GTCCTATCGG TGTTCAACAA GGGACCACAC GCCTTCTATG TCATCAAGGG TGGCTCAATC GCCAGTGTTG CCGACGTCAA GGGCAAGACC ATCGCCACAT CGCCGTTTAC CTCGTCCAAT GTCTATCTGC CGCTGGTGCT GAAGGACCAG TCCATCGATC CGGCGGCGAT CAAGCTGATC AAGGCCGATC CCGGTGCGCT CGGTCCGATG CTGATGACCG GCAATGCCGA TGGCATCATT GCCTGGATGA CGGATTTCAC CCGCTATTCC AACCAGGCCC GCCAGGCTGG CAAAGAAATC GTCGCGCTGC CGTGGTCGGC TGCCGGGCTT GAGCTTTATT CGGCCTCGTT GATTGCCAGC GAGGATTTCC TGGCCAAGCG CCCGGATGTC GCCAAACGTT TCATCGACGC CTACAAGAAG TCGGTGCAAT TCACCCGCGC CAATCCTGAT GCCGCCGTCA CCTCCGTCAC CAGTGTGGTG CCGGAACTGG GGTCGGAAGA CGTCAAGGGA TCGATCAATG ACACGCTGCC GCTGATTTTC AATGAGGTCA CGGACAAGGA TGGCTTGGGC GTGTTCGAGC CCAAGCGCCT GACGGAAACC TGGCGCCGGG TTGCCGCCGC CCAAGCCATC GATCCGGCCA AGCTTGACCC GGAAACGGTG GTCAACCGCA GCTTCATTCC GACGGAGTGA
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Protein sequence | MFRRKLASTL FTLGLFSGTA LAADKVTFQL DWLPGGDKAP IYVCIHQGFC RDAGLDVTIA SGRGSTEAIS KLAAGSSDIG VSDIGALMAA RANEGVKVIG VLSVFNKGPH AFYVIKGGSI ASVADVKGKT IATSPFTSSN VYLPLVLKDQ SIDPAAIKLI KADPGALGPM LMTGNADGII AWMTDFTRYS NQARQAGKEI VALPWSAAGL ELYSASLIAS EDFLAKRPDV AKRFIDAYKK SVQFTRANPD AAVTSVTSVV PELGSEDVKG SINDTLPLIF NEVTDKDGLG VFEPKRLTET WRRVAAAQAI DPAKLDPETV VNRSFIPTE
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