| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5394 |
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| Symbol | thuR |
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| ID | 7381498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 395436 |
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| End bp | 396473 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649006 |
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| Product | transcriptional regulator LacI family |
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| Protein accession | YP_002547243 |
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| Protein GI | 222106452 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00772538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGGCA TACATCAGCT TGCAAAACAT CTCGACATCT CTATCGGGAC CGTGTCGCGC
GCGCTGAATG GACGCCCCGA CGTCAACGCG GAAACGCGAC GGCGGGTACT GGAGGCCGCT
GAGGAACTGG GCTATGTCGC CAATCAGTCG GGCCGCAGCC TGCGCAAGGG GTCAACCAAC
GTCATCGGAC TGATGATCGA GTCCGGCAAG GACAATGCCG ACAACAGCGA CAACTTCTTT
TTCGGCGTCA TGGACGGTTT GCAGACGGTG TTTGCCCGGC ACAATCTCGA CCTCGTCCTG
CTCCCCTGCC CTGCCGACGA AGACCCCCTG GAATATCTTC AGCGCATGGT GGCCCGCCGC
CTGGTCGATG CGATGATCAT TTCGGCTACG CAGAGGGTCG ATAAGCGTAT TGATCTGTTG
ATCAAAACCA AAATACCCTT TGTAACCTTG GGGCGCAGCA CGTCGGGCGG CAGCCATACC
TGGATCGACC TCGATTTTGC CGGTGTCGCC AATTCCGCCG TGGATCGACT GGTGTCGAAA
GGTCACCGTC GCATCGCCAT CGCCGCCCCC TGCACTGATA TCAACCTCGG CACCGTGTTT
ACCGACGCCT ATCAGGCCGC GCTGGAGCGC AACGGCCTGG CCTTCGATCC GGCCTTGGTG
CTGCGGGCGA AATCCAGCGA AAGCGGCGGC TATAGCGTGG GCAGCGAGCT GCTGGCGCTC
GATCCGCGCC CGACCGCCAT CATCCTGATT TACGAACTCA TGGCGATCGG CCTCTACAGG
CGGCTGGCTG AGGCCGGCGT CATCCCCGGC CGGGACATGG CCGTCATCGG GTTTCGTGAA
GCGCCCCGCG CCCGGTTTCT GCAACCCGCT CTGACCTGCT ACCGCCTTTC CCTGGAGGAT
CTCGGGGTGG AACTGGCCGA AACCTTGCTC GCCTCAATGC CGGATTATGC GGAAACATAC
AGAACCCATG CCCGCAATCG CCTCTGGCCA CTAGAACTGG TTCCGGGCGA AAGCGATGCC
TTCGACCTGC TGACATAG
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| Protein sequence | MKGIHQLAKH LDISIGTVSR ALNGRPDVNA ETRRRVLEAA EELGYVANQS GRSLRKGSTN
VIGLMIESGK DNADNSDNFF FGVMDGLQTV FARHNLDLVL LPCPADEDPL EYLQRMVARR
LVDAMIISAT QRVDKRIDLL IKTKIPFVTL GRSTSGGSHT WIDLDFAGVA NSAVDRLVSK
GHRRIAIAAP CTDINLGTVF TDAYQAALER NGLAFDPALV LRAKSSESGG YSVGSELLAL
DPRPTAIILI YELMAIGLYR RLAEAGVIPG RDMAVIGFRE APRARFLQPA LTCYRLSLED
LGVELAETLL ASMPDYAETY RTHARNRLWP LELVPGESDA FDLLT
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