| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5388 |
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| Symbol | |
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| ID | 7381493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 389727 |
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| End bp | 391001 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649001 |
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| Product | glucose/galactose transporter |
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| Protein accession | YP_002547238 |
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| Protein GI | 222106447 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR00885] L-fucose:H+ symporter permease
[TIGR01272] glucose/galactose transporter |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGGAA TTCAAACAGG CGCGCCGCAA ACCGCGCACG CAGGAGCCAG CCGCTCCTAT
ACCGGTCCGC TGATCGCGCT GACCTCTCTT TTCTTCCTCT GGGGCTTCAT CACCTGCCTC
AACGATATTC TCATCCCACA TCTGAAAAAC GTATTTCAGC TGAATTACAC GCAGACCATG
TTGATCCAGC TGTGCTTCTT CGGCGCTTAT TTTATCGTTT CCTTGCCCGC AGGGGCTCTC
GTCAAACGCA TCAGCTATAA ATGGGGTATT GTTACGGGTC TTCTCGTTGC CGCCATCGGT
TGCGCTTTGT TCATCCCCGC CGCAAGCCTG CGGGTCTATG GCCTGTTTCT CGGCGCGCTG
TTCGTGCTGG CGGCGGGCGT CACTATTCTC CAGGTGGCGG CAAACCCCTA TGTCACCGTG
CTGGGCGCAC CCGAAACGGC ATCGAGCCGT CTCACCCTAA CCCAGGCCTT CAATTCGCTG
GGCACCACCG TCGCGCCGAT TTTCGGTGCC TTCCTCATTC TGTCTTCGGC AACGGCTGCC
GTTGAAAATG CCACACCGGA GCAGATGGAC GCCCTGCGCA TGGCGGAAGC CGCAGCGGTC
AAATTTCCGT ATCTGATGCT GGCTATCGCC TTCCTTGTTC TCGCTGCCAT TTTCGCAGCA
TTGAAATTGC CAGCGGTTGA GGCAGAAGAA GATGCCAAGT CCAGCGATGT GTCCGGCTCC
GCCTGGGGCT ATCGCCACCT GGTTCTCGGC GCGGTCGGCA TTTTTCTTTA TGTCGGCGCG
GAAGTCAGCA TTGGCAGCTT CCTGGTCAAT TTCATGGCCG AACCCAGCAT TGCCGGGCTG
CCTGAACAGA CGGCTGCCCA TTACGTCTCC TATTTCTGGG GCGGCGCCAT GATCGGGCGT
TTCATCGGTT CCGCCGTGAT GCGCTATATG GATGACGGCA AGGTTCTGGC CTTCAATGCG
GTCGCAGCCG GTATTTTGCT GCTGGTCACC GTGCTGACAA CAGGCCATGT CGCCATGTGG
TGCGTGTTGT CGATTGGCTT CTTCAACTCG ATCATGTTCC CGACCATTTT CAGCCTGGCG
CTGAAGGGCC TGGGTCGCCA TACCAGCCAG GGTTCCGGCA TTCTTTGCCT CGCCATTGTC
GGCGGCGCTT TGTTGCCCCT GGTACAGGGC GGGCTTGCCG ATACGGTCGG CATCCACCTC
GCCTTCCTGA TGCCGATCCT CTGCTACGTC TATATCGCCT ATTATGGCGC TCTCGGTTCC
AGAACCGCAG CATAA
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| Protein sequence | MAGIQTGAPQ TAHAGASRSY TGPLIALTSL FFLWGFITCL NDILIPHLKN VFQLNYTQTM
LIQLCFFGAY FIVSLPAGAL VKRISYKWGI VTGLLVAAIG CALFIPAASL RVYGLFLGAL
FVLAAGVTIL QVAANPYVTV LGAPETASSR LTLTQAFNSL GTTVAPIFGA FLILSSATAA
VENATPEQMD ALRMAEAAAV KFPYLMLAIA FLVLAAIFAA LKLPAVEAEE DAKSSDVSGS
AWGYRHLVLG AVGIFLYVGA EVSIGSFLVN FMAEPSIAGL PEQTAAHYVS YFWGGAMIGR
FIGSAVMRYM DDGKVLAFNA VAAGILLLVT VLTTGHVAMW CVLSIGFFNS IMFPTIFSLA
LKGLGRHTSQ GSGILCLAIV GGALLPLVQG GLADTVGIHL AFLMPILCYV YIAYYGALGS
RTAA
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