Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5378 |
Symbol | |
ID | 7380731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 379047 |
End bp | 380600 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643648992 |
Product | hydantoinase |
Protein accession | YP_002547229 |
Protein GI | 222106438 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTACCGAT TGGGAATAGA TGTGGGCGGC ACCAATACGG ATGCCGTTGT CATGCAGGGC GGTAAGGTTC TGTCGGGTAT CAAGGCTCCA ACCTCGGAGG ATGTCACCAC GGGCGTGGTC GAGGCCATGG AAGGGGCTAT CAAAGCCGCA GGCATTGACC GCAGCCTTGT GACCAATGTG ATGATCGGCA CCACCCATTT CACCAATGCG GTGATTGAGC GCAAGCATAT GACCCCGGTT GCCGCCATCC GCCTCGGCCT GCCCGCCACC GCCTGCCTGC CGCCTGCGAT AGACTGGCCG GAAGACCTGA AGCCCGTGGT GGGCAAGCAT GGCTATATGG TGCGCGGCGG CTATGAGTTT GATGGCCGTG AAATTTCGCC GCTGGATGAA GATGAGATCA AGCGTATTGC CGGTGAAATC CGCGCCAACA ATCTCAAGGC CGCAGCTGTC ACGTGCGTGT TCGGCCCGAT CAATGCCGCG ATGGAGCAGC GGACCAAGGC GATTTTGCAG GAGCATTGCC CCGGCCTGCC GGTGGTGATG TCCACCGACA TTGGCCGCAT CGGATTGCTG GAGCGCGAAA GTGCGGCGAT CATGAACGCC AGCCTGTTGG AACTGGCCTA TAAAACCGTA CGGGCCTTTG GCGAAGCGCT CAAAAGCGCC GGGCTGACCT GCCCCTTTCA TATCACCCAG AACGACGGCA CGTTGATGGC GGCTGAGACG GTGAAGGATT TCCCGGTTCT GACCTTTGCC TCCGGCCCCA CCAATTCCAT GCGCGGTGCG GCCTTCCTCA CCGGCGTGCA GGAAGCCATT GTGGTTGATA TTGGCGGCAC GACGTCTGAT GTCGGCGCGC TGCATCTGGG CTTTCCGCGT CAGGCGGCAA CGGTGGTGGA TGTCGGCGGC GTGCGCACCA ATTTCCGTAT GCCGGATGTG TTTTCCATTG GTCTGGGTGG CGGGTCTCTG GTGCGTGGCG ATGCGGAAAC AGTTACCGTT GGTCCGCAAT CGGTGGGCTA TCGCATCACC TCTGAGGCCA AAGTGTTTGG CGGCGCAACG CTGACGGCCA CCGATATTGC CGTGGCCGCT GGCCATGCCG ATGTGGGCGA TAAGAGCAAG GTGGCCGATG TCTCACCCGC GCTTGCCAAG GCAGCGCTTG CCCGTATCCA TCAGATGCTG GAAAATGCCA TTGAGCGCAG CCGGGTCTCG CCAGAGCCAA TTCCGGTCAT CGCCGTTGGC GGCGGCTCTA TCCTGATGCC GGATAAGCTG GGCGATTTTC AGATCATCCG GCCTGAGAAT TTCTCGGTTG CCAATGCTGT GGGCGCTGCC ATTGCCCAGA TTTCCGGCGA AGTAGACCGG GTCTTTGCCC TTGAAAATGG CCTCACCCGC GAGCTGTGCC TGAAGCAGGC CGAAGAGGAA GCCACGAAAA ACGCCGTTGC CGCAGGCGCT GATCCCACCA CCATTCAGGT GATTGAGCGT GAAGATGTGC CGCTGGCCTA TCTGCCCGGC AATGCCACCC GCATCCACGT GAAAGTCGTG GGTGAGATGG GAGGGCAAGC ATGA
|
Protein sequence | MYRLGIDVGG TNTDAVVMQG GKVLSGIKAP TSEDVTTGVV EAMEGAIKAA GIDRSLVTNV MIGTTHFTNA VIERKHMTPV AAIRLGLPAT ACLPPAIDWP EDLKPVVGKH GYMVRGGYEF DGREISPLDE DEIKRIAGEI RANNLKAAAV TCVFGPINAA MEQRTKAILQ EHCPGLPVVM STDIGRIGLL ERESAAIMNA SLLELAYKTV RAFGEALKSA GLTCPFHITQ NDGTLMAAET VKDFPVLTFA SGPTNSMRGA AFLTGVQEAI VVDIGGTTSD VGALHLGFPR QAATVVDVGG VRTNFRMPDV FSIGLGGGSL VRGDAETVTV GPQSVGYRIT SEAKVFGGAT LTATDIAVAA GHADVGDKSK VADVSPALAK AALARIHQML ENAIERSRVS PEPIPVIAVG GGSILMPDKL GDFQIIRPEN FSVANAVGAA IAQISGEVDR VFALENGLTR ELCLKQAEEE ATKNAVAAGA DPTTIQVIER EDVPLAYLPG NATRIHVKVV GEMGGQA
|
| |