Gene Avi_5378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5378 
Symbol 
ID7380731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp379047 
End bp380600 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content61% 
IMG OID643648992 
Producthydantoinase 
Protein accessionYP_002547229 
Protein GI222106438 
COG category[E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTACCGAT TGGGAATAGA TGTGGGCGGC ACCAATACGG ATGCCGTTGT CATGCAGGGC 
GGTAAGGTTC TGTCGGGTAT CAAGGCTCCA ACCTCGGAGG ATGTCACCAC GGGCGTGGTC
GAGGCCATGG AAGGGGCTAT CAAAGCCGCA GGCATTGACC GCAGCCTTGT GACCAATGTG
ATGATCGGCA CCACCCATTT CACCAATGCG GTGATTGAGC GCAAGCATAT GACCCCGGTT
GCCGCCATCC GCCTCGGCCT GCCCGCCACC GCCTGCCTGC CGCCTGCGAT AGACTGGCCG
GAAGACCTGA AGCCCGTGGT GGGCAAGCAT GGCTATATGG TGCGCGGCGG CTATGAGTTT
GATGGCCGTG AAATTTCGCC GCTGGATGAA GATGAGATCA AGCGTATTGC CGGTGAAATC
CGCGCCAACA ATCTCAAGGC CGCAGCTGTC ACGTGCGTGT TCGGCCCGAT CAATGCCGCG
ATGGAGCAGC GGACCAAGGC GATTTTGCAG GAGCATTGCC CCGGCCTGCC GGTGGTGATG
TCCACCGACA TTGGCCGCAT CGGATTGCTG GAGCGCGAAA GTGCGGCGAT CATGAACGCC
AGCCTGTTGG AACTGGCCTA TAAAACCGTA CGGGCCTTTG GCGAAGCGCT CAAAAGCGCC
GGGCTGACCT GCCCCTTTCA TATCACCCAG AACGACGGCA CGTTGATGGC GGCTGAGACG
GTGAAGGATT TCCCGGTTCT GACCTTTGCC TCCGGCCCCA CCAATTCCAT GCGCGGTGCG
GCCTTCCTCA CCGGCGTGCA GGAAGCCATT GTGGTTGATA TTGGCGGCAC GACGTCTGAT
GTCGGCGCGC TGCATCTGGG CTTTCCGCGT CAGGCGGCAA CGGTGGTGGA TGTCGGCGGC
GTGCGCACCA ATTTCCGTAT GCCGGATGTG TTTTCCATTG GTCTGGGTGG CGGGTCTCTG
GTGCGTGGCG ATGCGGAAAC AGTTACCGTT GGTCCGCAAT CGGTGGGCTA TCGCATCACC
TCTGAGGCCA AAGTGTTTGG CGGCGCAACG CTGACGGCCA CCGATATTGC CGTGGCCGCT
GGCCATGCCG ATGTGGGCGA TAAGAGCAAG GTGGCCGATG TCTCACCCGC GCTTGCCAAG
GCAGCGCTTG CCCGTATCCA TCAGATGCTG GAAAATGCCA TTGAGCGCAG CCGGGTCTCG
CCAGAGCCAA TTCCGGTCAT CGCCGTTGGC GGCGGCTCTA TCCTGATGCC GGATAAGCTG
GGCGATTTTC AGATCATCCG GCCTGAGAAT TTCTCGGTTG CCAATGCTGT GGGCGCTGCC
ATTGCCCAGA TTTCCGGCGA AGTAGACCGG GTCTTTGCCC TTGAAAATGG CCTCACCCGC
GAGCTGTGCC TGAAGCAGGC CGAAGAGGAA GCCACGAAAA ACGCCGTTGC CGCAGGCGCT
GATCCCACCA CCATTCAGGT GATTGAGCGT GAAGATGTGC CGCTGGCCTA TCTGCCCGGC
AATGCCACCC GCATCCACGT GAAAGTCGTG GGTGAGATGG GAGGGCAAGC ATGA
 
Protein sequence
MYRLGIDVGG TNTDAVVMQG GKVLSGIKAP TSEDVTTGVV EAMEGAIKAA GIDRSLVTNV 
MIGTTHFTNA VIERKHMTPV AAIRLGLPAT ACLPPAIDWP EDLKPVVGKH GYMVRGGYEF
DGREISPLDE DEIKRIAGEI RANNLKAAAV TCVFGPINAA MEQRTKAILQ EHCPGLPVVM
STDIGRIGLL ERESAAIMNA SLLELAYKTV RAFGEALKSA GLTCPFHITQ NDGTLMAAET
VKDFPVLTFA SGPTNSMRGA AFLTGVQEAI VVDIGGTTSD VGALHLGFPR QAATVVDVGG
VRTNFRMPDV FSIGLGGGSL VRGDAETVTV GPQSVGYRIT SEAKVFGGAT LTATDIAVAA
GHADVGDKSK VADVSPALAK AALARIHQML ENAIERSRVS PEPIPVIAVG GGSILMPDKL
GDFQIIRPEN FSVANAVGAA IAQISGEVDR VFALENGLTR ELCLKQAEEE ATKNAVAAGA
DPTTIQVIER EDVPLAYLPG NATRIHVKVV GEMGGQA