| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5371 |
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| Symbol | fadD |
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| ID | 7380724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 369048 |
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| End bp | 370562 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643648985 |
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| Product | malonyl-CoA synthase |
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| Protein accession | YP_002547222 |
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| Protein GI | 222106431 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.132829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACC ATCTTTTTGA TGCTATCAAG GCCGCAGCAA GGCCTGATTC ACCATTCATT
CTGACCAATG GCGGAAGGAT CTGGACGTAT GACGATGCGA TTGCGCTTTC CGGACAGATT
GCTGGCGCTA TTGCCAAGCT CGGCATTCAG CCCGGCGACC GGATTGCAGT GCAGATCGAG
AAAAGCCCGG AAGCGCTGAT CCTCTACCTG GCCTGCCTTC GCGCCGGCGC GGTCTACCTG
CCGCTGAACA CGGCCTATAC GCTTGCCGAA CTGGATTATT TCATTGGTGA TGCCGAGCCG
AAGCTGGTGG TTGTCTCCTC CTCCGCGCTG GAGCCGCTGC GCAAGGTTGC CGAGCCCTAT
GGTGCGCGCG TTGAAACGTT GAACGCGGAC GGCTCAGGCT CGCTGATCGA TCTTGCCCGC
ACCGAACCGA CCGATTTCGC CAATGTCGCC CGCGCTTCCG ACGATCTCGC CGCCATCCTT
TATACGTCGG GAACAACCGG TCGCTCCAAG GGCGCGATGC TGACCCATGA CAATCTCCTG
TCGAATGCCT TGACCCTGCG CGATTTCTGG CGCGTCACAA GCGATGACCG GCTGATCCAT
GCCCTGCCGA TTTTCCATAC GCACGGGCTG TTCGTCGCCA CCAATGTGAC CCTGCTGTCT
GGCGCGTCAA TGATCCTGTT GCCAAAATTC GATCCTGACG AAGTGCTGTC ATTGATGCCG
AATGCCACGC TTCTCATGGG CGTTCCAACC TTTTACGTGC GCCTCCTGCA AAGCCAGAAG
CTGGACCGGG AGATTACGGC CAATATACGC CTTTTCATCT CCGGTTCTGC GCCACTGCTG
GCCGAGACCC ATGTCGAATT CGGCAAGCGC ACAGGCAAAG CGATCCTTGA GCGCTATGGC
ATGACCGAAA CCAACATGAA TACATCCAAC CCCTATGACG GAGACCGGGT TCCAGGAACC
GTCGGCCTGC CGCTGCCGGG CGTGACTGTT CGCATCACCG ATCCCGCAAA TGGCACAATT
TTGCCAGCGG GTGAAACAGG GTCGATTGAA ATCAAGGGGC CCAATGTCTT CAAGGGCTAT
TGGCGGATGC CTGAAAAGAC CGCTGCTGAA TTTACCGCCG ACGGTTTCTT CATCAGCGGC
GATCTCGGCA AGATTGATGA GAACGGCTAT GTCCATATTG TTGGACGTGG CAAGGACCTG
GTGATCTCAG GCGGATACAA TATCTACCCC AAGGAGGTCG AAAGCGAGAT CGACCAGCTT
GAAGGCGTCG TCGAAAGTGC TGTTATCGGC GTACCCCACC CGGATTTTGG CGAGGGCGTA
ACCGCCATTG TCATCTGCAA GCCGGGCTTC TCGCTCGATG AGAAGGCAAT TCTCAATGCG
CTTCAGGATC GGCTTGCCCG CTACAAGCAG CCCAAGCGCA TTATTTTCCT GGAAGACCTG
CCGCGCAATA CGATGGGCAA GGTCCAGAAG AATGTTCTGC GCCAGCAATA TGCCGATCTT
TACGCGGCAG CCTGA
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| Protein sequence | MSNHLFDAIK AAARPDSPFI LTNGGRIWTY DDAIALSGQI AGAIAKLGIQ PGDRIAVQIE
KSPEALILYL ACLRAGAVYL PLNTAYTLAE LDYFIGDAEP KLVVVSSSAL EPLRKVAEPY
GARVETLNAD GSGSLIDLAR TEPTDFANVA RASDDLAAIL YTSGTTGRSK GAMLTHDNLL
SNALTLRDFW RVTSDDRLIH ALPIFHTHGL FVATNVTLLS GASMILLPKF DPDEVLSLMP
NATLLMGVPT FYVRLLQSQK LDREITANIR LFISGSAPLL AETHVEFGKR TGKAILERYG
MTETNMNTSN PYDGDRVPGT VGLPLPGVTV RITDPANGTI LPAGETGSIE IKGPNVFKGY
WRMPEKTAAE FTADGFFISG DLGKIDENGY VHIVGRGKDL VISGGYNIYP KEVESEIDQL
EGVVESAVIG VPHPDFGEGV TAIVICKPGF SLDEKAILNA LQDRLARYKQ PKRIIFLEDL
PRNTMGKVQK NVLRQQYADL YAAA
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