| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5354 |
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| Symbol | |
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| ID | 7380709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 352977 |
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| End bp | 353951 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648970 |
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| Product | ABC transporter nucleotide binding/ATPase protein (oligopeptide) |
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| Protein accession | YP_002547207 |
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| Protein GI | 222106416 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCC TGATCGAAAT GAACGGCATC AAAATGGCCT TCGCCGTGAC CGGCGGGGCG
TTCCAGCGAG TGAAAGGCTA TGTCAACGCC GTCAATGATG TCAGCCTCAC CATCGAGCGC
GGGCGCACGC TGGGTGTGGT CGGTGAAAGC GGCTGCGGAA AATCCACGCT GGCCCGCATC
GTGGTGGGTC TGTTCGCGCC GACCGCAGGC GAAATCATCT TTGATGACAA GCAGATTGCC
GGACCCGGCA TGGGTGTTGA TTTCGCCTCT TCCCGCCGCA TTCAGATTGT CTTTCAAGAC
CCTTACTCCT CGCTGGATCC ACGGTTGCCG ATTGGTGACT CCATTGCCGA AGGCTTGGTC
ATCCACGGCA TTGGCGACAA GGCCAGCCGT CGCAAGGCCG TTGCCGACAT GCTGGAACTG
GTCGGCCTGC CGCCGCAGGC TGCGGACCGC TATCCGCATG AATTCTCAGG TGGCCAGCGC
CAGCGCATCG GCATCGCCCG CGCCCTCATT CTCCAGCCGG AATTTCTGGT TTGTGATGAG
CCAACGTCTG CACTGGATGT GTCGGTACAG GCGCAAATCC TCAATCTTTT GAAACGGCTA
AAAACCCAGC TTAACCTTAC CATGATGTTC ATTTCTCACA ATCTGGCCGT GGTGCGCCAC
ATCGCCGATG ATGTGGTGGT GATGTATCTC GGCCATGCGG TGGAACTTGG CCCGGTGGAA
GCGCTGTTTA CCAATCCGCG CCATCCCTAT ACCAAGGCGC TTCTCTCCGC GACGCTGATT
GCCGATCCAG ACCGGCGAGG CGAGCGGATC AAGCTCGTTG GCGAAATGCC GTCTCCGCTC
AATCCACCCA CGGGCTGTCC CTTCCATCCT CGCTGCACGC TGGCCAATGA CCGCTGCAAG
GCGGAAATGC CACTGATGAC CATGACGGAC ACCGTCCAGG TGGCCTGTCA TGCCGTTGAA
GAAGGTCGGG CTTAA
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| Protein sequence | MSALIEMNGI KMAFAVTGGA FQRVKGYVNA VNDVSLTIER GRTLGVVGES GCGKSTLARI
VVGLFAPTAG EIIFDDKQIA GPGMGVDFAS SRRIQIVFQD PYSSLDPRLP IGDSIAEGLV
IHGIGDKASR RKAVADMLEL VGLPPQAADR YPHEFSGGQR QRIGIARALI LQPEFLVCDE
PTSALDVSVQ AQILNLLKRL KTQLNLTMMF ISHNLAVVRH IADDVVVMYL GHAVELGPVE
ALFTNPRHPY TKALLSATLI ADPDRRGERI KLVGEMPSPL NPPTGCPFHP RCTLANDRCK
AEMPLMTMTD TVQVACHAVE EGRA
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