| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5350 |
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| Symbol | dppB |
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| ID | 7380706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 349915 |
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| End bp | 350994 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648967 |
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| Product | ABC transporter membrane spanning protein (dipeptide) |
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| Protein accession | YP_002547204 |
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| Protein GI | 222106413 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGGAT ATGCAGCCAA ACGCCTGCTG ATTTCCATCC CGGTGATTTT CGGCATTCTG
ATCGTGACCT TCGCGCTTGC CCGGTTAATT CCTGGCGATC CCTGCAAGGC CATGCTGGGA
GAAAAAGCCA CCGCCGAGAC CTGCGCTGGT TTCATCACGC GCTACGGCTT CGATAAGCCG
CTGCCAACGC AGTTTTTCAT TTATATGGGC GATATGCTGC GGGGTGATTT CGGCACATCG
GTGCGCTTCT CGCGGCCTGT GACGCAGATC ATTATCGAGC GCCTGCCGAT GACCGCCGAG
CTTGCCGTGC TGGCGCTGAT CACCGCGACC GTTATCGGTG TCGGGCTCGG GGTTATTGCC
GCCCGCCGTC ATAATTCAGC AGCCGATGTC GGCACCATGA TTGTTGCCAA TGCCGGCATT
TCCATGCCGG TGTTCTGGCT GGGGTTGATG CTCGCCTATT TGTTCGGGGT GATGCTGCGC
GGCACGCCCT TCTGGCTGCC GCCATCCGGG CGGCTTTCCG CCGGTGTCAA TTCCATTCCC
TTTTACGAGG TCTGGCACTG GCAATTGGCG GCGGAGAGCG GCTGGAGCAA GGTGCTCGAA
TTCTTCTCCA ACTTTTATAT TCTGAACGCC TTGATCACCG GCAATTGGAC GGTGTTCTGG
GATGCCATAC GCCACATGAT CTTGCCGGTC ATGGCGCTCT CCACCATCCC GATGGCGGTG
ATTGCCCGCA TGACCCGCTC CTCGCTGCTG GATGTGCTGG GGCGTGATTA TGTCCGCACC
GCCCGCGCCA AGGGCGTGCC GGAAAAACGT GTGGTCAGCG AACATGCGCT GGGCAATGCG
CTGTTGCCGG TTGTCACCAT TCTGGGCTTG CAAATGGGCG CCCTGCTCAG TGGCGCCGTG
TTGACCGAAA CTGTTTTTGG CCTGTCCGGC GTGGGGCGTA TGCTGGTTGA GGCGATTTTT
GCGCGGGACT ATCCAGTCGT GCAGGCCTTC ACGGTGATGA TTGCCGTGTC CTACGTGGCT
ATCAACCTGC TGGTGGACCT TTCCTACACC TATCTCGATC CTCGCATTCG CCCACAATAG
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| Protein sequence | MLGYAAKRLL ISIPVIFGIL IVTFALARLI PGDPCKAMLG EKATAETCAG FITRYGFDKP
LPTQFFIYMG DMLRGDFGTS VRFSRPVTQI IIERLPMTAE LAVLALITAT VIGVGLGVIA
ARRHNSAADV GTMIVANAGI SMPVFWLGLM LAYLFGVMLR GTPFWLPPSG RLSAGVNSIP
FYEVWHWQLA AESGWSKVLE FFSNFYILNA LITGNWTVFW DAIRHMILPV MALSTIPMAV
IARMTRSSLL DVLGRDYVRT ARAKGVPEKR VVSEHALGNA LLPVVTILGL QMGALLSGAV
LTETVFGLSG VGRMLVEAIF ARDYPVVQAF TVMIAVSYVA INLLVDLSYT YLDPRIRPQ
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