| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5334 |
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| Symbol | vdh |
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| ID | 7380694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 335340 |
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| End bp | 336872 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648955 |
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| Product | vanillin: NAD oxidoreductase |
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| Protein accession | YP_002547192 |
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| Protein GI | 222106401 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.488891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGCGG CATTGGCGTG GCGAAGGCGC GTAAAACCGG CAAGAGGAGG AGACGTCTTG
CAACAGAATA TTGGTCAGTC CGCATTCCAA CCACAGGCCT ATGAAGGGTT TTCCGGACAG
TATATTGCCG GTCGCTGGGT GGAAGGCACC GAGGGAAAGA CGGCCCTTGA TCGCAATCCT
TACGATGATA CGGTTGTGGC GGAAATATCC CAGGCAAGCC TTGACGACCT TAATCGTGCC
TTCGGTGCAG CCAAGGCTGC CCAAACCGAA TGGGCGCGGG TATTGCCGAG CGAGCGCGCA
GCGGTGTTTC TGAGAGCGGT CTCGATTCTT GACGCCCGCA AGGAAGAAAT CATTAGCTGG
ATTATCCGTG AATCCGGCAG TACACGCATC AAGGCTGGCA TAGAATGGGG CGCGGTGCGC
GCTGGCATGC TGGAAGCCGT CACCTTGCCC GCGGCCGCCC AGGGACATAT CATTCCGGTC
GACAAGCCAG GCAAGGAAGC GCGGGTTTAC AAGAAGCCCG TCGGCGTCGT CGGTGTTATC
AGCCCGTGGA ATTTTCCGCT GCATCTGTCG AACCGCTCTG TCGCGCCGGC GCTTGCGCTT
GGAAACGCCG TCGTTTTGAA ACCGTCGAAC GACACGCCGG TCACAGGCGG CCTTCTCTTG
GCCAAGATCT ATGAGGAAGC TGGCCTGCCA GCAGGCTTGC TCAATGTCGT GGTCGGTAGC
TCGAGCGTCA TCGGCGACGC TTTCTCGCGT CATCCGGTTC CTCGCGTCCT CACCTTTACC
GGCTCCACGC CCGTCGGACG CCATATCGCC CAGGTGGCGG GTGAATCCTC CCTGCTGAAG
CGTGTCGGCC TTGAGCTTGG CGGCAATGCA CCGCTGGTGG TTCTCGATGA TGCCGATCTG
GAAAAGGCTG TTGGAGCGGC CCTGATCGGT CGTTTCATGC ATCAAGGCCA AATCTGCATG
AGCACGAACC GCATCATCGT CGACGCCTCG ATTTATGACA ATTTCGTCGA GGCTTTTACT
GCTGCGGTAA AGACGATCAA ATTCGGAAAT CCGAACGAGC CGGATACCTT GATCGGCCCG
CTTTGCAACG ACAGCCAGCT GCGCAGCGTG ACCGCAAGCA TTGCGCGGGC GCGCGACAGC
GGCTTCCGCG AATGCGTATC CGGCCCCATT GAGGGACGGG TGGTGGCACC ACATGTCTTT
GCCGATGTGA CCAACGATTC CGACTTCGCC CGCAATGAGA TCTTTGGCCC GGTCGCACCG
ATCATCCGCG CTCAAGATGA AGCCCAGGCT TTGGCCTTCG CCAATGACAC CGAATTTGGC
CTTTCCAGCG CCGTCTTCAC CCGTGACGAG GCCCGTGGAT TGGCCTTTGC TCAGCAGATT
GAAGCTGGAA TGTCCCATAT CAACGACATC ACCATCCATG ACTATCCGCA TGTGATGTTT
GGTGGAGAGA AAAACTCCGG TCTCGGACGC TTTAATGGCA AATGGGCCGT TGAAGAGTTC
ACAACGGATC ATTTCATCTC GGTCCAGCGA TAA
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| Protein sequence | MLAALAWRRR VKPARGGDVL QQNIGQSAFQ PQAYEGFSGQ YIAGRWVEGT EGKTALDRNP
YDDTVVAEIS QASLDDLNRA FGAAKAAQTE WARVLPSERA AVFLRAVSIL DARKEEIISW
IIRESGSTRI KAGIEWGAVR AGMLEAVTLP AAAQGHIIPV DKPGKEARVY KKPVGVVGVI
SPWNFPLHLS NRSVAPALAL GNAVVLKPSN DTPVTGGLLL AKIYEEAGLP AGLLNVVVGS
SSVIGDAFSR HPVPRVLTFT GSTPVGRHIA QVAGESSLLK RVGLELGGNA PLVVLDDADL
EKAVGAALIG RFMHQGQICM STNRIIVDAS IYDNFVEAFT AAVKTIKFGN PNEPDTLIGP
LCNDSQLRSV TASIARARDS GFRECVSGPI EGRVVAPHVF ADVTNDSDFA RNEIFGPVAP
IIRAQDEAQA LAFANDTEFG LSSAVFTRDE ARGLAFAQQI EAGMSHINDI TIHDYPHVMF
GGEKNSGLGR FNGKWAVEEF TTDHFISVQR
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