| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5326 |
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| Symbol | catE |
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| ID | 7380687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 325759 |
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| End bp | 327915 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643648949 |
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| Product | catalase C |
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| Protein accession | YP_002547186 |
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| Protein GI | 222106395 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0753] Catalase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAGC AACGGTCCCA AAACCAAGGC AAGAATGCGG CTGCAATCTC GAATGAGGCC
ACCATCCACG ATCAGAAACT TGTGCGCGGC AAGGGCGGCG AACTTCACCA GATCGCTGAA
AATGATCAGG TTTTGACCAC AGCCCAGGGA GGGCCTGTCG CAGACGATCA GAACTCCCTT
CGCATTGGGG ATCGTGGTCC GCTTGTCGTT GACGACTTCC ATTTCAGAGA AAAGATTTTC
CACTTCGACC ATGAGCGCAT TCCAGAGCGC GTCGTTCATG CCCGAGGCTA CGGTGCCCAC
GGCTTCTTTG AAACCTACGA ATCCTTTGCG GAGTATACGC GCGCCGACGT GTTCCAGCGG
CCCGGTGAGA AAACCCCTGT TTTCGTTCGG TTTTCGACGG TGGCGGGAAA CAAGGGCTCA
GCCGACCTTG CCCGCGACGT ACGCGGCTTT GCGGTGAAAA TGTACACGAA GGAAGGCAAT
TGGGATCTGG TTGGCAACAA CATTCCCGTC TTTTTCATAC AGGATGCCAT CAAGTTTCCC
GATCTTATCC ACGCCGCGAA ACAGGAGCCA GACCGGGCAT TCCCCCAGGC ACAGACCGCC
CATGACAATT TCTGGGATTT CATTTCTCTG ACGCCCGAGA GCATGAACAT GATCATGTGG
ATCATGTCGG ATCGGACAAT CCCGAGATCA TTGCGCTTTA TGGAAGGTTT CGGCGTCCAT
ACGTTCCGCT TCGTCAATGC CAATGACGAA TCCACCTTCG TCAAGTTCCA TTGGAAACCG
AAGCTCGGCC TTCAATCGGT GGCCTGGAAC GAAGCGGTCA AAATCAATGG CGCCGATCCG
GATTTCCATC GACGCGATCT GTGGCATGCA ATCAAGTCTG GAAACTTTCC CGAATGGGAA
TTGCAGGTCC AGCTGTTCGA TCAGGAATTT GCCGACAGCT TTGATTTCGA CGTGCTCGAT
CCGACAAAAA TCATCCCGGA AGAAATCCTG CCACCGAAGG CAATCGGTCG GCTGGTGCTG
GATCGGATGC CGGACAACTT CTTTGCAGAG ACCGAGCAAG TGGCATTCAT GACGCAGAAT
GTTCCGCCGG GGATCGATTT CAGCAACGAC CCTCTGCTGC AAGGCCGCAA TTTCTCCTAT
CTCGACACCC AGCTGAAACG TCTGGGCGGA CCGAATTTCA CCCATCTGCC GATCAATGCA
CCAAAGTGTC CCTTCGCGAA TTTCCAGCAG GATGGCCATA TGGCGATGCG CAATCCGGTG
GGTCGAGCGA ATTATCAGCC GAACTCATTT GGCGAGGGAC CCCGGGAATC GCCAACGCGC
GGCTATCGTC ACTTTCCTGC GGAGGAACAG GGTACCAAGG TCCGCCTGCG CCCGGAAAGC
TTCGCCGATC ACTACAGCCA GGCCCGGCAA TTCTATATCA GCCAAACGCC CCTGGAACAG
CGCCACATTG CAGCCGCTCT GACGTTCGAG CTAAGCAAAG TGGAAATGCC TGTCATCCGG
GAGCGGATGG TGGCGCATCT GATGAATATC GATGAAACGC TGGCCACGAC CGTCGCGGAA
AAACTGGGCT TTAAAAGCAT GCCCAAGCCG GCTGATGCTG CTGTGCCGAC ACGCGACGAC
CTTGAGCCGT CCCCTGCACT CAGCATCATC AAGCGAGGCC CCAAGCGCTT CGAAGGCCGC
AAACTCGGCA TCCTGATCAC CGATGGCGTC GACGTGAAGC TTCTCAAGGC GCTGACGGAC
GCTGTCACCG CGGCAAAAGC CGAATTCGAG TTGATTGCCC CAAAGGTTGG CGGAGTGACG
GGTTCCGACG GCACCTGGAT CGAAGCGCAT CATATGATCG ATGGAGGACC ATCCGTCCTG
TTTGACGCCG TGGCGGTTCT GACCTCAGAT GCTGGCATGG CAGATCTTGT GAAGGAAGCA
ACGGCCCGGG ATTTCGTTGC CGACGCCTTT CAGCACTGCA AGTTCATCGG TTATACCCAA
AGCGCCATGC CCCTTTTCGA GAAGGCTGGC ATAACCGAAG ATCTCGATGA AGGTACTATT
GGACTTCCCG GAGAAGATGG TATTGCCGAT TTCATCGAGA AGCTGGGCAA ACTGCGCGTC
TGGGCGCGGG AGCCTTCTGT AAAACTCGGG AAAGCATCCG TGCCTCTGGA CGATTGA
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| Protein sequence | MPKQRSQNQG KNAAAISNEA TIHDQKLVRG KGGELHQIAE NDQVLTTAQG GPVADDQNSL
RIGDRGPLVV DDFHFREKIF HFDHERIPER VVHARGYGAH GFFETYESFA EYTRADVFQR
PGEKTPVFVR FSTVAGNKGS ADLARDVRGF AVKMYTKEGN WDLVGNNIPV FFIQDAIKFP
DLIHAAKQEP DRAFPQAQTA HDNFWDFISL TPESMNMIMW IMSDRTIPRS LRFMEGFGVH
TFRFVNANDE STFVKFHWKP KLGLQSVAWN EAVKINGADP DFHRRDLWHA IKSGNFPEWE
LQVQLFDQEF ADSFDFDVLD PTKIIPEEIL PPKAIGRLVL DRMPDNFFAE TEQVAFMTQN
VPPGIDFSND PLLQGRNFSY LDTQLKRLGG PNFTHLPINA PKCPFANFQQ DGHMAMRNPV
GRANYQPNSF GEGPRESPTR GYRHFPAEEQ GTKVRLRPES FADHYSQARQ FYISQTPLEQ
RHIAAALTFE LSKVEMPVIR ERMVAHLMNI DETLATTVAE KLGFKSMPKP ADAAVPTRDD
LEPSPALSII KRGPKRFEGR KLGILITDGV DVKLLKALTD AVTAAKAEFE LIAPKVGGVT
GSDGTWIEAH HMIDGGPSVL FDAVAVLTSD AGMADLVKEA TARDFVADAF QHCKFIGYTQ
SAMPLFEKAG ITEDLDEGTI GLPGEDGIAD FIEKLGKLRV WAREPSVKLG KASVPLDD
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