| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5311 |
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| Symbol | |
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| ID | 7380675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 311704 |
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| End bp | 312987 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648937 |
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| Product | indole dioxygenase |
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| Protein accession | YP_002547174 |
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| Protein GI | 222106383 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.316901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATGA ACGCAAAGCA GTTTGACTAT GTACTGCCCA ATCCACCCAT CTCTCCTTAT
AGCACTGAGG TTGGCCGTGA GATCCGTGCC AAAGCTGCGG CATTGGTGCC GCTGTTGCGT
AAACACGCCC AGGAAGGCGA GGAATTGGGT GCCCTGGCGC CTGAAAGCTT GAAAGCCTTG
AGCGATATTG GTGCGTTCAA ACTTACATTG CCAACGGATT TTGGCGGGCA TGCGCTTGGA
GCGCGCGATG TGGTTGAGAT CGTCACCGAA TTTGGCCGAG GCGATGGCGC GGCGGGCTGG
ATGGCATTTG TCGCCGGTGG CCTGCGCAAT ATCCTGGCGT TTCCCGATCA GGCTGTGAAT
GAAATCTTTG CGGATGGGCG TGACTGGGTT GGCCCACTGG CCGCCGGAGC GTCGATTTTT
GCCACCAAGG TTGGCTCGGC GCGGCGGGTC GAGGGCGGCT GGATGGTCAG CGGCTCCTGG
CATTTCGGTA GCGGTTGCAA ACATGCCAAA TGGATTGCCG TGGGCGTCGA TTATGAGGTT
GCGCCGGGCC ATATGGGCCG CGCCATGGCG GTTTTGAAGG CCGAGCAGGT CAAGATCATC
GATAACTGGC ATGTCATGGG CATGAAGGCC ACGTCCTCCA ATAGCCTGAC GGTGACCGAA
GAGCAGTTCG TTCCCGATCA CCGATTTATG GATATGGCTG ATTTCCCGGT TCGCATGGAT
GGAACACGCA AGCGTTTCCA GGGCTTTGCC AGCAAGTTCG ATGGCCGTGG TCTGATGATC
ATGACCAATC TCACCCATAT GGCGATCGTG CTGGGGATGG CTCGTGGCGC GCTGGAATCC
TACATCGACA TGGCGAGAAA GCAGCAGCCC TTCAATCTGC CTTATCCCCG GGTGGCCGAA
ATGGCATCGA CGCAGGTCTG TGCTGCAAAA GCCTATGCGA TGATCAAGAT GGCGGAAACC
ACCGCCCTTT GCGCCGCCGA TCTTCTGGAT CGCCACGCAA CGGAAGGACG CGAGGTCTCA
GAGGAGCTGG AACAGGCGAC GATGATGGAA AACGTCTACG CCGCGCACAC CTTGGACAAT
GCCGTCAGCA TCCTGCAACT CAATATTGGC TCCGCAACCG CGCATGAAAG CAATCCGTTC
CAACGGTTCG TGCGCGATAT CCGGGTGGCA ATGCTGCATG GGGCGGTCAG GCTGGAGCCA
ACAGCCGAGA TTTTCGGGCG CCGGATGATG GGACTTGCGC CATTTTCGAT GTTTGCAGGC
GGATTGCCTG ATCGCGCCGC TTAG
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| Protein sequence | MEMNAKQFDY VLPNPPISPY STEVGREIRA KAAALVPLLR KHAQEGEELG ALAPESLKAL
SDIGAFKLTL PTDFGGHALG ARDVVEIVTE FGRGDGAAGW MAFVAGGLRN ILAFPDQAVN
EIFADGRDWV GPLAAGASIF ATKVGSARRV EGGWMVSGSW HFGSGCKHAK WIAVGVDYEV
APGHMGRAMA VLKAEQVKII DNWHVMGMKA TSSNSLTVTE EQFVPDHRFM DMADFPVRMD
GTRKRFQGFA SKFDGRGLMI MTNLTHMAIV LGMARGALES YIDMARKQQP FNLPYPRVAE
MASTQVCAAK AYAMIKMAET TALCAADLLD RHATEGREVS EELEQATMME NVYAAHTLDN
AVSILQLNIG SATAHESNPF QRFVRDIRVA MLHGAVRLEP TAEIFGRRMM GLAPFSMFAG
GLPDRAA
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