Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5296 |
Symbol | |
ID | 7380663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 299389 |
End bp | 299838 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643648925 |
Product | transcriptional regulator MarR family |
Protein accession | YP_002547162 |
Protein GI | 222106371 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGCGG TGGAACTGGA TGTTCTGGAA AATGTCCTCA GCTATTACAT CCGTACGATC AACATGGCGG TTTCCCGCGA TCTCGATCAG AAACTTGGTA AGCTCGAGGT TGCCAAGGGG ACCGGCAAGA TCACCACGCT GTTGTTGGTC GATAGCCATC CAGGCATCCG GTCCTCCGCC ATCGCGCAAC TTATCCTGAA GGATCGTTCG GCCATGGTAC GGTTGGTTGA TCAGATGGAA GAGCAGGAGC TCCTGCGGCG CGAGGTGGAT GACGACGACA ACCGTGCCCA AGGCCTGTTC ATCACGCCCA AGGGTGCTGC TCTGGCAAAG CGTGTTCGTC CCCTTGTCGT GAAACAATCG CGGGATTTCT TTCCCGATAT TACCGACGAA GAACATCAGA TGCTGATCTC GGTACTCGGG CGTACCTATC GGCGCATTAT TGGTCTTTAG
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Protein sequence | MAAVELDVLE NVLSYYIRTI NMAVSRDLDQ KLGKLEVAKG TGKITTLLLV DSHPGIRSSA IAQLILKDRS AMVRLVDQME EQELLRREVD DDDNRAQGLF ITPKGAALAK RVRPLVVKQS RDFFPDITDE EHQMLISVLG RTYRRIIGL
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