Gene Avi_5296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5296 
Symbol 
ID7380663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp299389 
End bp299838 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content55% 
IMG OID643648925 
Producttranscriptional regulator MarR family 
Protein accessionYP_002547162 
Protein GI222106371 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCGG TGGAACTGGA TGTTCTGGAA AATGTCCTCA GCTATTACAT CCGTACGATC 
AACATGGCGG TTTCCCGCGA TCTCGATCAG AAACTTGGTA AGCTCGAGGT TGCCAAGGGG
ACCGGCAAGA TCACCACGCT GTTGTTGGTC GATAGCCATC CAGGCATCCG GTCCTCCGCC
ATCGCGCAAC TTATCCTGAA GGATCGTTCG GCCATGGTAC GGTTGGTTGA TCAGATGGAA
GAGCAGGAGC TCCTGCGGCG CGAGGTGGAT GACGACGACA ACCGTGCCCA AGGCCTGTTC
ATCACGCCCA AGGGTGCTGC TCTGGCAAAG CGTGTTCGTC CCCTTGTCGT GAAACAATCG
CGGGATTTCT TTCCCGATAT TACCGACGAA GAACATCAGA TGCTGATCTC GGTACTCGGG
CGTACCTATC GGCGCATTAT TGGTCTTTAG
 
Protein sequence
MAAVELDVLE NVLSYYIRTI NMAVSRDLDQ KLGKLEVAKG TGKITTLLLV DSHPGIRSSA 
IAQLILKDRS AMVRLVDQME EQELLRREVD DDDNRAQGLF ITPKGAALAK RVRPLVVKQS
RDFFPDITDE EHQMLISVLG RTYRRIIGL