| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5294 |
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| Symbol | |
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| ID | 7380662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 297354 |
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| End bp | 299003 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648924 |
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| Product | ABC transporter nucleotide binding/ATPase protein (peptide) |
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| Protein accession | YP_002547161 |
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| Protein GI | 222106370 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.26421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAAAT CTGTTCAAGA CGATGCAATC GAGGCAGGTA CGCTGCTGTC CGTGCAAGGA
TTGACTGTCG GCTTGCCGCC GGGCATGGAT CGCCGATATG CGGTGGAAGA TATGTCCTTC
GACCTGAAGG CTGGAGAAAT TCTCTGCATT ATCGGCGAGT CCGGCTCGGG CAAATCCGTG
ACGGCCAATG CCACGATGGG GCTTCTGGCG CAGTCTCTCC ACATTGTATC CGGCAGCATC
ATGCTGGAGG GCCAGGAACT GGTCGGTGCC GATGCCGCCA CCTTGCGTGC GTTGCGTGGC
CGGATCGTTT CGATGATTTT CCAGGACCCG TTGTCGGCGC TCAACCCTTT GATGACCGTC
GGCGATCAGA TCGCCGAGGT CATGGAAGCC CACGGCATTG GCACGCAGCA GGAGCGCCGG
GCGCGTGTTC TCGACCTGAT CACCGAAGTG GGGCTGCCGG ACCCGGAACT GATGCAGCAT
CAATATCCCT TCCGATTGTC CGGCGGTCAA CGACAGCGCG TGATGATTGC CATGGCGCTG
GCGCTTGAAC CGAAGGTGTT GATCGCTGAT GAGCCGACCA CCGCCCTCGA CGTGACGACA
CAGGCGCAGA TTCTTGAGTT GATCGCGTCT ATCCAGCGCC GCAAGCAGAT GAGCGTGATG
TTCATCACTC ATGATTTCGG CGTGGTGGCC GAGATTGCCG ACCGTGTGAT TGTCATGGAA
AAGGGGCATG TCGTCGAACA AGGGTCGGCT TCCGTGGTGC TGAAAAGCCC TGATCATCCC
TATACGCAAC GGCTGATCGC CGCCGTGCCG CGGATGCGCG CAAGCGACCG TGAGAATGAG
GCGGATACGC CTGTTGTTCT GGAGGCCCGC AATCTCTGCA AGACCTATGG GACTGGTTCA
GGTTTCCTGT CGAAGGGCCG GGTGATCAAG GCGGTCGATG ATGTCTCCTT CACGATCGCC
AAAGGCCGGA CGCTGGGTAT TGTCGGGGAA TCCGGGTCGG GGAAATCATC GCTCGGCCGT
CTTCTCGTCA AACTGATGAA CAGCGATTCC GGCGAAATCC TCTTCGGTGG CCGTGATATT
GCACCCCTGT CGGAAGAGGC TTTCCGCTCG ATGCGGCCCT ATATCCAGAT GATCTTTCAA
GATCCTTTCG CCTCCCTCAA TCCGCGCCAG ACCATCGGTC GCATCTTGAC CGTCGGGCCG
GTGGCACAGG CGACGCCCAT TCACGAGGCG CGAACACGCG CGATGCGGCT TCTGGAGCGG
GTCGGCCTCG ATGCAGGCGC CTATGATCGG TATCCACATG AGTTTTCAGG CGGCCAGCGC
CAGCGTATCG GTATAGCCCG CGCATTGATG TTCAATCCCA TGCTGATCGT AGCGGATGAA
GCCGTTTCGG CGCTCGATGT TTCGATCCAG GCGCAGATCC TTCAGCTGCT GACGGAAGTG
CAGCAGGAAA TGAAACTGGC CATGGCCTTT ATCACCCATG ATCTGCGCGT CGCCAGCCAG
ATCTGCGATG AGATCGCGGT GATGTATAAG GGCCGTATTG TCGAATACGG ACCACCCTCG
CAGATCTTCC GCAACCCTAC CCATGATTAT ACCCGCCAAC TCGTTTCCGC TATTCCCGGA
ACCGAATGGG AGCCTGCCGT GATGGTGTAA
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| Protein sequence | MPKSVQDDAI EAGTLLSVQG LTVGLPPGMD RRYAVEDMSF DLKAGEILCI IGESGSGKSV
TANATMGLLA QSLHIVSGSI MLEGQELVGA DAATLRALRG RIVSMIFQDP LSALNPLMTV
GDQIAEVMEA HGIGTQQERR ARVLDLITEV GLPDPELMQH QYPFRLSGGQ RQRVMIAMAL
ALEPKVLIAD EPTTALDVTT QAQILELIAS IQRRKQMSVM FITHDFGVVA EIADRVIVME
KGHVVEQGSA SVVLKSPDHP YTQRLIAAVP RMRASDRENE ADTPVVLEAR NLCKTYGTGS
GFLSKGRVIK AVDDVSFTIA KGRTLGIVGE SGSGKSSLGR LLVKLMNSDS GEILFGGRDI
APLSEEAFRS MRPYIQMIFQ DPFASLNPRQ TIGRILTVGP VAQATPIHEA RTRAMRLLER
VGLDAGAYDR YPHEFSGGQR QRIGIARALM FNPMLIVADE AVSALDVSIQ AQILQLLTEV
QQEMKLAMAF ITHDLRVASQ ICDEIAVMYK GRIVEYGPPS QIFRNPTHDY TRQLVSAIPG
TEWEPAVMV
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