| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5287 |
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| Symbol | |
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| ID | 7380655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 287951 |
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| End bp | 290641 |
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| Gene Length | 2691 bp |
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| Protein Length | 896 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643648917 |
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| Product | two component response regulator |
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| Protein accession | YP_002547154 |
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| Protein GI | 222106363 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.318061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAAAT TTTTCAATCT CACCCTAAAG AGTGATAGGC TCAGCGAACT CAATGATTTT
CAGGGGGGAC CTGTGCAACG AACGCGCCTT TTAAACAGAC GATCTGTGCC GCCCAGCGCT
TCGACAGGCC TGATCGACCG TCCGCGCCTG ACGCGACTGT CGCAGCTTCT CAGCAAACAC
CGGCTGGCGC TCGTCCATGC CCCGGCTGGC TCCGGCAAGA CCACGCTTCT CGCCCAATGG
CATCGGAGCC TGTCGGATGC CGGGTTTTCG ACCGTCTGGT ATTCGGCAAG CGAAGACGAC
AAAGATCCGT TCAATTTCGC CGAGGGCCTG CTCCAGGCAC TTCAGCAATC GATCGCTGAT
AATCGCGATC ATCTGCCCTC CCTTGATCGC GCCGACGCGC TGCAACGCTT GACGGCTCTG
CTCACCGATC AATCCATCCG CCAGCCGCTG GCCTTGTTTA TCGACGATTA CCATCTGGCC
GAAGGCGGCG ATGGTGGCGA GGCGATCAAT ACGATCCTCG CCAGCCGCTT GCCGAGCCTG
ACCGTCGTGC TCGCCAGCCG CAACCGGCCT GCCATACCCG TTGGCCGGTA CCGGGCCAAC
GGCGAGATGA TCGACATTGC CGTGGAAGAC CTGCATTTCA GCGAGGAAGA GACCGAGGCG
TTTTTTCGCA CCGCCTCCAA TGTCGCCTTG ACGGCAGACG AAAGCCGCCA GATGCATGAT
CATACCGAGG GTTGGGCGGT CGGCTTGCGG CTGGCAGCCC TGGTTACAGG GCGGGCGACG
GGCAATTTCG TCGCCGCTGC GCCATCTGGA AGCCATCGCG CATTTGCCGA CTATTTCCTG
GAGGAAGTCA TTGCCGGACT GCCTGCCGAG GTTTGCGACT TCCTCGCCAA GACCTCCCTC
TTGGAAACGC TGAATGCCGA CCTCTGCAAC GCCGTGACCG GTCAGCGTGA CGGAGACCGG
ATGCTGGCCT TCCTGGAGCA AAGCCAATTG TTTGTCGTTG AGCTTCCGGG AACGCAGCGG
TGGTACAAGT ATCACCATCT GTTTCAGGAG TTTCTGCAAA CCCGCCTTTA TGGCGACGAC
CGGCCTGCTG TCGAAGACAT TCACGCCCGC GCCGCGCAAT GGTTCATCGA CAATGGTTCG
CCCGTCGATG CCGTCCGTCA TGCCTTTCTC GCGCGCCAGT CCAAATGGGC GGCAGAATTG
ATCGAAACCT ATTGCCTGTA CGACTATCTC AGCCATGGCC GTTTCGACAC CTATTCCCGC
TGGATGCAGC AACTGCCCCG AGAGGCCCGC GAGGAAAGGC CGCTGCTGCT TTTCCTGCAC
GTGTGGCGGT CCATCAACAT GCGCCGCTTC TTGCAAGCCG AACAAACCCT TCAGACGATA
GAGGCGGCAG CCAGCGACCC GAATAGTCCT GTATCCCTCA TCGCGGCCCG AACGGGTCTC
GATATCAGCG GACGGCTCCA TCTCATGCGG GCGCTTATCG GTGCCTATGG CGGCGATTTC
ACAGTCGGAA GCTTTCACCT CTCCCAACTG GCCGGAAAAG AGCTTGACCG GCTGGCCTTC
GGACAGGTCG ACCTCGACTC CATTCACAGC TATTTCGCCT TCAATCTGGG CAAGCTGGAT
CTGGCGGAAC GGCTGACATG GCGGGCAAAT GGTGTCTATG ACGACATGGC CTGCCATTGG
GGCGGGATTC ATTCCCGCTG CATTGCCGCC ATGTCCTACC TCGCCCGTGC GCTGTTTCAG
GAAGCCCGGC ATGTGATTGT CGAAGCCCTG GCGATTGCCG AGCAGAATTT CGGGGAACAC
TCCTACATGG TCGCCCTGCC ATCGGCGCTT TTGGGACTGA TTGCCTATGA CGACAATGAT
CTTGAAAAGG CCGAGCGCCT GTGGCGACGG GCGATCCCGG CTGAAAAGGC AACGGATGTT
TCCGGGCTGT GCGAACGGAT CCTGATTGCC ACAACCGGTC TCGTGCGGCT TCTCGATATA
ACTGGCCGGG TCGAGGAGGC AACGGCACTT CTCGTTCGTG CCAGCAGGAG AGCCTATGAG
GCGGAAGATT TTCGCCTCGA ATTCCAGCTC GGTATAGAGC GGGCCGACAG GGCCTTTCGT
CTCAACAGCC CCGCAGAGGG CCGCCGCGAA TGGGAACGGC TGTCGCTGCA ATTGCCCGAG
GCACGCAACC GGTTTCCCTC TTCCGCCTGG CAGATATGGG ACCCATTTCG CATTGTCGAG
GCCAGAATCC TGCGCAATGC CGGACAGATC GATGCCGCAG CAGAAAAGCT TCGGACGCTT
GCCGCAGGGG CGCGGCAGGA AGGCCGTATT CTGATGGCGC GACAGGCAGA AGCGCTCGCC
AAGGTTATTG CGCCCGCCCA TGAGGCCGAG GAGACGCAGC CTGCGGATCT TGAGGATGAC
ACCATGGCCA CCCGGCGCAT CTTGCGCGAT TTCATTTCAC CCGTTGCCGC GTCTCCGAAC
CCCGGCGGAG GGCAAAGGCA GGAGGCCCGG CTCAGTCTGC GTGGCTCCCT CACCGAGTTG
ACGCAGCGGG AAGACGACGT GCTGCAATTG ATGCGGTGGG GGCTTTCCAA CAGCGAAATC
GCCACCAGGC TCGATATCAA TTTGAATACC GTGAAATCGC ACGCCAAGAA CATTTTTGCC
AAGCTCGGTG TGAAAAGCCG AACCCAAGCC GTTCTGAAGA CCCTCGAATA G
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| Protein sequence | MLKFFNLTLK SDRLSELNDF QGGPVQRTRL LNRRSVPPSA STGLIDRPRL TRLSQLLSKH
RLALVHAPAG SGKTTLLAQW HRSLSDAGFS TVWYSASEDD KDPFNFAEGL LQALQQSIAD
NRDHLPSLDR ADALQRLTAL LTDQSIRQPL ALFIDDYHLA EGGDGGEAIN TILASRLPSL
TVVLASRNRP AIPVGRYRAN GEMIDIAVED LHFSEEETEA FFRTASNVAL TADESRQMHD
HTEGWAVGLR LAALVTGRAT GNFVAAAPSG SHRAFADYFL EEVIAGLPAE VCDFLAKTSL
LETLNADLCN AVTGQRDGDR MLAFLEQSQL FVVELPGTQR WYKYHHLFQE FLQTRLYGDD
RPAVEDIHAR AAQWFIDNGS PVDAVRHAFL ARQSKWAAEL IETYCLYDYL SHGRFDTYSR
WMQQLPREAR EERPLLLFLH VWRSINMRRF LQAEQTLQTI EAAASDPNSP VSLIAARTGL
DISGRLHLMR ALIGAYGGDF TVGSFHLSQL AGKELDRLAF GQVDLDSIHS YFAFNLGKLD
LAERLTWRAN GVYDDMACHW GGIHSRCIAA MSYLARALFQ EARHVIVEAL AIAEQNFGEH
SYMVALPSAL LGLIAYDDND LEKAERLWRR AIPAEKATDV SGLCERILIA TTGLVRLLDI
TGRVEEATAL LVRASRRAYE AEDFRLEFQL GIERADRAFR LNSPAEGRRE WERLSLQLPE
ARNRFPSSAW QIWDPFRIVE ARILRNAGQI DAAAEKLRTL AAGARQEGRI LMARQAEALA
KVIAPAHEAE ETQPADLEDD TMATRRILRD FISPVAASPN PGGGQRQEAR LSLRGSLTEL
TQREDDVLQL MRWGLSNSEI ATRLDINLNT VKSHAKNIFA KLGVKSRTQA VLKTLE
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