| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5276 |
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| Symbol | |
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| ID | 7381395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 276755 |
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| End bp | 277867 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648907 |
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| Product | cytosine deaminase |
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| Protein accession | YP_002547144 |
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| Protein GI | 222106353 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.478094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCAA CGCTGTCACT TGGCATGCCG CGCATGAATG TGTCCGGCAC ATTGTTGGAA
GGTATCGCGC TCTGGGGTGA GCTGCGACCG CTGCTGACCA AGGAAGCGCT GGTTGAACGC
GCCCTGCGCT ACTGCGATCT CGCCGTCTCC CAAGGCCTGC TGTTTATCCG CAGCCATGTC
GATACGTCGG ATCCAAGACT GGTCACAGCA GAAGCCCTGA TTGAGGTGCG CGAACGGGTG
GCTCCCTATA TTCAATTGCA GCTCGTGGCC TTTCCGCAGG ATGGCTATTA CCGCGCTGAA
GGCGGCGTTT CCTCGCTCAA CCGCGCACTC GATATGGGCA TCGACATCGT TGGCGGCATT
CCGCATTTCG AGCGGACAAT GGATGAGGGA AGACTTTCAC TGGAGGCTCT CTGCCGCATT
GCGGCCGAAC GGGGCCTGCC GGTCGATATC CATTGCGACG AAACCGACGA TCCGATGTCA
CGCCATATCG AGACGCTGGC GGCAGAAACC ATTCGCCATG GGCTGCAAGG CCGCGTGGCG
GGATCGCATC TCACCTCCAT GCATTCCATG GATAATTATT ACGTCTCCAA GCTCATTCCG
CTGATGGCAG AAGCCCAGAT CAACGTCATT CCCAACCCGC TGATCAACAT CATGCTGCAA
GGCCGCCACG ACACCTATCC GAAACGCCGT GGCATGACGC GGGTGCGCGA ACTGATGGCA
GCAGGCCTGA ACGTCTCTTT CGGTCAGGAT TGCACCATGG ACCCATGGTA TTCAATGGGA
TCGGCCGACA TGCTGGAGGT TGGTCACATG GCCATCCACG TCGCGCAGAT GGGCGGGCTG
GATGACAAGA GACAGATTTT TGACGCGCTT ACCGTCAATT CGGCAAAAAC CATGGGTCTC
GAAGGCTATG GTCTGGAGAT CGGCTGCAAG GCAGACCTTA TCGTGTTGCA GGCGGCAGAC
GTATTTGAGG CGCTGCGCCT CAAGCCATCA CGCCTGTTTG TGGTCAAGGG CGGTAAGGTA
ATTTCCCGCA CCGCACCCCG CATTGGAGAA CTGTTTCTGG AAGGCCGCCC TGCGGCTGTC
GATAGCGGGC GCGATTACGT ACCCGTTTAC TGA
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| Protein sequence | MDATLSLGMP RMNVSGTLLE GIALWGELRP LLTKEALVER ALRYCDLAVS QGLLFIRSHV
DTSDPRLVTA EALIEVRERV APYIQLQLVA FPQDGYYRAE GGVSSLNRAL DMGIDIVGGI
PHFERTMDEG RLSLEALCRI AAERGLPVDI HCDETDDPMS RHIETLAAET IRHGLQGRVA
GSHLTSMHSM DNYYVSKLIP LMAEAQINVI PNPLINIMLQ GRHDTYPKRR GMTRVRELMA
AGLNVSFGQD CTMDPWYSMG SADMLEVGHM AIHVAQMGGL DDKRQIFDAL TVNSAKTMGL
EGYGLEIGCK ADLIVLQAAD VFEALRLKPS RLFVVKGGKV ISRTAPRIGE LFLEGRPAAV
DSGRDYVPVY
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