| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5274 |
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| Symbol | |
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| ID | 7381394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 275617 |
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| End bp | 276561 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648906 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002547143 |
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| Protein GI | 222106352 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.34998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCTA TGATGGACAT CCTCGCTTCA ACCGGCCTGT GGGCCGCAGT CCTCAGAATT
GCGACGCCCT TGATTTTCGG CACACTCGGC GCGCTGCTGT GCGAACGGGC GGGCGTGCTT
AATCTTGGCA TCGAAGGCAT CATGACGTTC GGTGCCATGA TCGGCTGGTT ATCGGTTTAT
CACGGTGCTG ATCTATGGAC TGGCCTGCTG ATTGCGGCTC TGGCAGGTGG AGTTTTCGGC
GCTTTACATG CGCTTTTGAC GGTAACCCTC GGACTATCCC AGCATGTCTG TGGCCTCGGA
ATCACGCTGT TTGCCTCCAG TTTCAGCTAT TACACCTTCC GTCTGGCGGT TCCAGTCGCA
GGCTCCCCGC CAACCATCGT TCCGTTCAAG CCAATTGCCA TTCCGGGCCT CAGCGATCTG
CCCTTTGTCG GACCTGCCTT TTTCGTGCAG ACCCCGCCAA CCTATCTCGC CATTCTGCTG
GCGATCATTC TGGCTTACGT GATCTTTCGC ACGCCGCTTG GCCTTGCCAT CCGCATGACC
GGCGAAAACC CCCATGCGGC GGAAGCGCAA GGGATCAATC CAATGGCGGT GCGCTATGGT
GCCGTGATTG CTGGCTCTGC CCTGATGGGC ATGGCAGGCG CTTTCCTGAC ACTGTCGGCC
TTCAACAGCT TTTTCCCCAC CATGGTGCAG GGACGCGGCT GGATCTGTAT CGCACTCGTG
GTGTTTTCCT CATGGCGTCC GGGCCGGGCA CTGCTGGGTG CGCTGCTTTT TGCATTTTTC
GATGGCTTTC AACTGCGCCT GCAAACCGCT CTCGGTGGGG CCGTGCCCTA CCAACTGTTT
TTGATGACCC CCTACATCCT GTCCATCGCA GCCCTTGCAG TGATGGCGCG CCGCGCCCGC
GTACCGCAAG CGTTGATGCA ACCCTATCGG CGCGGCGAGC GCTGA
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| Protein sequence | MSAMMDILAS TGLWAAVLRI ATPLIFGTLG ALLCERAGVL NLGIEGIMTF GAMIGWLSVY
HGADLWTGLL IAALAGGVFG ALHALLTVTL GLSQHVCGLG ITLFASSFSY YTFRLAVPVA
GSPPTIVPFK PIAIPGLSDL PFVGPAFFVQ TPPTYLAILL AIILAYVIFR TPLGLAIRMT
GENPHAAEAQ GINPMAVRYG AVIAGSALMG MAGAFLTLSA FNSFFPTMVQ GRGWICIALV
VFSSWRPGRA LLGALLFAFF DGFQLRLQTA LGGAVPYQLF LMTPYILSIA ALAVMARRAR
VPQALMQPYR RGER
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