| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5273 |
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| Symbol | |
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| ID | 7381393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 274571 |
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| End bp | 275620 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648905 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002547142 |
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| Protein GI | 222106351 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGTTTG AGCGACGCGA ACATCGACCT CTTGTGCTTG TCATCGCCAC GCCCATCATG
GCCATTGTCG CCGCGCTGGC GATCTCAGGC ATTCTCATTG CCATTGCGGG TGCGCCAGTT
CTGGAAGCCT ATTGGCGTAT CCTGATCGGC GCTTTCGGCT CGCGGCTCTC GACCACAGAA
ACACTGACCC GCGCAACACC TCTAATGCTG ACAGGTCTTT CTGCGGCAGT GGCGTTTCGG
GCGCGGCTGT GGAACATCGG GGCCGAGGGC CAGCTTTATC TCGGTGCCAT CACCGTTGCG
GCGGCAAGTT CGCATCTTTT GAGCGATTTT CCCCCAGTCA TCCAAATTCC CGCCCTGCTG
ATCCTCGGTG CGCTCGCGGG CATGGTTTTG CTGCTCGTAC CGCTTTGGCT GCGCCTGCGT
TTTTCCGTGG ACGAGGTGGT GACGACCTTG CTGCTCAATT TCGTTGCCGT GCTGTTTGTC
TCAATGCTGA TTGATACCGG GTTGAAAGAT CCGATGGCTT TCGGTTGGCC GCAGTCGCAA
TCGGTGGCTG ATGCTGCCAT GCTGCCAAAG CTGTTGGCGC GTTCACGCCT GCATTTGGGC
CTCGTTATTG CTGTGGTGCT GGCGCTTGTG CTGCATTTTG TTCAACAGCG CACGGTGTTT
GGTATTCGCT CACGTGCGGC TGGCCTCAAT CCGGCAGGTG CCGTTTTTGC AGGCGTCCCG
CTTGGCCGCA CGCTGGTCAT GGTTGCTTGC ATTTCCGGTG GTCTTGCGGG GCTTGCAGGG
GCTGTGGAAG TCATGGGCGT TAAGGGCTAT GTGACGACGG ATCTCTCTCC CGGCTATGGC
TATTCCGGCA TAGTGGTGGC CATGCTGGCC AATCTTAATC CGCTGGGCGT TGTGCTGGCG
GCGCTGTTTA CCGCCACCAT GTTCGTCGGT GCCGACAGCA TGAGCCGCGC CATGGGCATT
CCCAGCTATA TTGCCGATGT GACGGTAGCT CTATCGCTGC TGACCATGTT GATCGCGCTG
TTTTTCACCC AATACAGGAT TGTCCGATGA
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| Protein sequence | MRFERREHRP LVLVIATPIM AIVAALAISG ILIAIAGAPV LEAYWRILIG AFGSRLSTTE
TLTRATPLML TGLSAAVAFR ARLWNIGAEG QLYLGAITVA AASSHLLSDF PPVIQIPALL
ILGALAGMVL LLVPLWLRLR FSVDEVVTTL LLNFVAVLFV SMLIDTGLKD PMAFGWPQSQ
SVADAAMLPK LLARSRLHLG LVIAVVLALV LHFVQQRTVF GIRSRAAGLN PAGAVFAGVP
LGRTLVMVAC ISGGLAGLAG AVEVMGVKGY VTTDLSPGYG YSGIVVAMLA NLNPLGVVLA
ALFTATMFVG ADSMSRAMGI PSYIADVTVA LSLLTMLIAL FFTQYRIVR
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