| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5272 |
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| Symbol | |
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| ID | 7381392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 273061 |
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| End bp | 274581 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648904 |
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| Product | ABC transporter nucleotide binding/ATPase protein (sugar/ribonucleotide) |
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| Protein accession | YP_002547141 |
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| Protein GI | 222106350 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.107055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGTGC CCGTGCTGGA CATTCTGGGT GTCAGCAAAC GATTTGGCAG CAATCTTGCC
AATGATGATA TTTCGCTATC GCTGGCAAAG GGCGAAATTC TGGCGCTACT GGGGGAAAAC
GGTGCTGGAA AAACCACCCT GATGAGCATC CTGTTTGGCC ATTATGTGCC AGATTCCGGC
AAGGTTCTGG TCGAGGGCAA GGAATTGCCG CCCGGCAAGC CGCGTGCCGC CATTCGGGCA
GGCATCGGCA TGGTGCATCA GCATTTTTCA CTGGCTCCAA ACCTGACCGT TTTGGAAAAC
GTCACAACGG GCACGGAAAG CCTGTGGTCC GTGCGGTCGC GGCGTGCGCA GGCGCGGGAA
AAGCTGATGG CCATTTCCAG CCGCTTCGGT CTGAAAGTTC ATCCAGATGC GCGTCTTGGT
GATCTCTCGG TGGGTGAGCA GCAGCGGGTC GAAATTCTCA AGGCGCTATA CAATGATGCC
CGCATTCTGG TGCTGGACGA ACCGACCGCT GTTCTGACCC AGATTGAAGC AGAAATGCTG
TTTACGACCT TGAAAGATAT GGCGGCACAG GGCCTGTCGC TGATTTTCAT TTCCCACAAA
CTCGATGAGG TCATGTCTGC CGCCGACCGG ATCGTGGTGC TGCGCGGTGG ACGGCGGGTG
GCGGAGCGCA AGGCAGCGGA GACCAGCAAG GCAGAGCTTG CCGAGCTTAT GGTGGGACGC
ACAGTGACCC GACCCGTTCG AGAGTCCTCT ACACCCGGTG ATATTGTTCT GGAAACGGCA
CACCTGAGCG TCCGCAAAGA CGGCGTCAAT GTGCTGAAGG CCATCGATTT CCGGCTGCGG
GCTGGCGAGG TTCTTGGTAT CATTGGTGTT TCCGGCAATG GTCAGGGCGT TTTGGCGCAA
GTGCTCTCCG GCACTATGCC GCATACGGCT GGCGACATTC TGTTGTTTGG CACCCCGGTG
GAGAACCTGT CGGTGGCGGA CGTCGTGACG GCAGGCATCG GCCGCATTCC CGAAGACCGC
AACAAGGAAG GAGCAATCGG CGAGATGGCG ATTTGGGAAA ATGCCATTCT TGAGCGGCTC
CCGGCCTTTT CACGGCACGG CCTTGTCAAC CGCAAGGCAG GCATGGAATT TGCCCGCACC
ATCATCGAGC AATTCGATGT GCGCGGCGGC ACCCCCGCCA GCCGCATCCG GCTGCTGTCC
GGCGGCAACA TGCAAAAACT CATTCTGGGC AGAAACCTAA TCAATCGCCC CCGTATTCTT
CTGGCCGCCC AACCCGCGCG GGGTCTGGAC GAAGGAGCCG TGGCGGCGGT ACACGAGCGC
ATTCTCGAAG CACGCCGGGC CGGAACTGCC GTGCTGCTGA TTTCCGAGGA TCTGGACGAG
GTCATGGCGC TTGCCGACCG CATTCAAGCC ATTGTCGGTG GCAGGCTGTC GCCGCCGATC
AATGCCGAAG ATGCCAATGC CCGCAAACTC GGCCTGATGA TGGCAGGCGA ATGGCAGGCG
GAGGTGTCCC ATGCGGTTTG A
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| Protein sequence | MMVPVLDILG VSKRFGSNLA NDDISLSLAK GEILALLGEN GAGKTTLMSI LFGHYVPDSG
KVLVEGKELP PGKPRAAIRA GIGMVHQHFS LAPNLTVLEN VTTGTESLWS VRSRRAQARE
KLMAISSRFG LKVHPDARLG DLSVGEQQRV EILKALYNDA RILVLDEPTA VLTQIEAEML
FTTLKDMAAQ GLSLIFISHK LDEVMSAADR IVVLRGGRRV AERKAAETSK AELAELMVGR
TVTRPVRESS TPGDIVLETA HLSVRKDGVN VLKAIDFRLR AGEVLGIIGV SGNGQGVLAQ
VLSGTMPHTA GDILLFGTPV ENLSVADVVT AGIGRIPEDR NKEGAIGEMA IWENAILERL
PAFSRHGLVN RKAGMEFART IIEQFDVRGG TPASRIRLLS GGNMQKLILG RNLINRPRIL
LAAQPARGLD EGAVAAVHER ILEARRAGTA VLLISEDLDE VMALADRIQA IVGGRLSPPI
NAEDANARKL GLMMAGEWQA EVSHAV
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