| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5270 |
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| Symbol | |
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| ID | 7381390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 270661 |
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| End bp | 271647 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643648902 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547139 |
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| Protein GI | 222106348 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.401628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTAAGC AGTTTTTGAT GTCGCGTCGA TCCGTACTGG CGTCGGGCAT GGCTCTGGGT
GTCAGCGCCT TTGCGCCATC TTTGCGGGCA GCAGCGCCGA TTAAGGTGGC GGGCATTCAT
GGTTCTCCGG TGGAAAATGC CTGGAACTCG GTATTACACA AGGCTTTGCA GGATGCCGCC
AAGGAAGGCA TGATTGAATA CGTGTTTTCC GAGGGCGTAT CCGGCACGGA TTATCCGCGC
GCGATGCGCG AATATGCCGA GCAGAATGCC AAATTGATCA TTGGCGAAAC CTTCCCCGTC
GAAAAACAGG CCCGCGAAGT CGCCGCCGAT TATCCGAAGA CGGCCTTTGT TATGGGCTCC
AGCGGCAAGC TGTCTGGCGA TAATTTTGGT GTTTTCGGCA CCTGGAATTT CGATGGCGCC
TATCTGGCCG GGATGCTGGC TGGCAAGATG ACCAAATCCA ACATCGTCGG CTCTGTCGGT
GCCATGCCGA TCCCGGAAGT CAATATGCTG ATCAATGCAT TTGGCGCAGG CGTAAAAGCC
GTTAACCCCA ATGCCAAGCA TCTTGTGACC TTCATCGGCA CGTTCTTCGA TCCGCCAAAA
GCACGCGAAG CGGGCCTTGC CCAGATTGAT GCAGGCGCAG ACATCCTGTT TGGCGAACGC
ATTGGCACGG CAGATGCGGC CAAGGAACGC GGCATCAAAT CCGTTGGCTC GTTGATCGAT
TACACCCCTC GTTATCCCAA TACGGTGTTT GCCAACGCGC TGTGGAACTT CCGCCCGATC
CTCAATGCTG CTCTGGCCGA TGTTGCAGCA GGCAAACCCA CTGGGCGCGA TTACACCGCC
TATGGCCTGA TGAAAGAAGG CGGCAGCGAC ATTGTTTTCG TCAAGGGTGT AGCACCCGCT
GATGCCGAAG CGGCGATGGA AGCCAAGCGC GCCGAGATCA AGGCCGGAAC GTTTGAAGTG
CCAAAGATCA TGACTGAGCC AAAGTAA
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| Protein sequence | MGKQFLMSRR SVLASGMALG VSAFAPSLRA AAPIKVAGIH GSPVENAWNS VLHKALQDAA
KEGMIEYVFS EGVSGTDYPR AMREYAEQNA KLIIGETFPV EKQAREVAAD YPKTAFVMGS
SGKLSGDNFG VFGTWNFDGA YLAGMLAGKM TKSNIVGSVG AMPIPEVNML INAFGAGVKA
VNPNAKHLVT FIGTFFDPPK AREAGLAQID AGADILFGER IGTADAAKER GIKSVGSLID
YTPRYPNTVF ANALWNFRPI LNAALADVAA GKPTGRDYTA YGLMKEGGSD IVFVKGVAPA
DAEAAMEAKR AEIKAGTFEV PKIMTEPK
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